Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00956 ATGGGTTGTGTCCATGGCAAGTGTTGTAGCCGCTACCCTCCACCATCAGTGGCTAGCTCCCGAGAACTTGGCCCTTACTGTGCACAAAGGAAGCACATACTCACTCAGATATCACCACAATTTGTTACTGTCCCTTCCCATAACTTTACTTTGGAATACTCTGTTCTCACTCAAAGGGGATACTACCCTGGCTCACCTGATAAGGAAAACCAAGATAGTTTCTGCATTAAGACACAATTTCAAGGTAACCCAAGTGTCCATTTCTTTGGTGTCTATGATGGGCATGGTGAATTTGGTGGACAGTGTTCAAACTTTGTTAAGGATAAGTTAGTGGAAAAATTGTCAAATGACCCTTCATTGTTGGAGGACCCTGTTAAAGCTTATACCTCAGCGCTCTTGGCAACAAATGATGACTTGCATAAGAATGAGATTGATGATTCTATGAGTGGCACTACTGCAATTACTGTGCTTGTTATTGGTGACACACTTTATGTTGCTAATGTTGGTGATTCTAGAGCAGTGCTGGCTGTTAAGGATGGGAATAGAATTGTAGCTGAGGACTTGTCCTCTGATCAGACACCATTCAGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGAATAAGGATCCTGATATTCAGACTTGGGGTGATGAAGAGAGTCAGGGTGATGATCCTCCTAGATTATGGGTTCAGGATGAGATGGTTCCTGGAGCTGCTTTTACAAGGAGTGTAGGGGATAGAGTGGGTGAGACTATTGGTGTCATTGCTGTTCCAGAGGTTTTAACGGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTTGCAAGTGATGGCATATTCGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCCGCAAGTTATTCAGATCCCCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTATAAACTATGGTTGGAGCATGAGGGCCGCACAGATGACATAACGATTATCATTGTTCAGATCAAAGGCCTGTCTAATTCAGGTACATCTAGATTTGGATCAGGCGAGATCAATGTCGGTACTGTAATGAAGGCCAAGAGGGGAAAGGGAACATCTGAGATATCTGCTACCACCGGATTAGATGTTTATCGTTCGGTGAGGAGTGGTTTCTCTGATTTACAGTCCTGTCAACAACATGTGGTCTCAATGAGAAGCCCAGCCTTAGTGGTTCCCTCTCCAGCAGGTCAAAGATCAGTTGAATTGTGA 1269 0.4413 MGCVHGKCCSRYPPPSVASSRELGPYCAQRKHILTQISPQFVTVPSHNFTLEYSVLTQRGYYPGSPDKENQDSFCIKTQFQGNPSVHFFGVYDGHGEFGGQCSNFVKDKLVEKLSNDPSLLEDPVKAYTSALLATNDDLHKNEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGNKDPDIQTWGDEESQGDDPPRLWVQDEMVPGAAFTRSVGDRVGETIGVIAVPEVLTVQLTPNHLFFVVASDGIFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSGTSRFGSGEINVGTVMKAKRGKGTSEISATTGLDVYRSVRSGFSDLQSCQQHVVSMRSPALVVPSPAGQRSVEL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00956 422 ProSiteProfiles PPM-type phosphatase domain profile. 52 342 IPR001932 -
Rops11g00956 422 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Rops11g00956 422 SUPERFAMILY PP2C-like 39 344 IPR036457 -
Rops11g00956 422 Pfam Protein phosphatase 2C 71 317 IPR001932 -
Rops11g00956 422 MobiDBLite consensus disorder prediction 223 238 - -
Rops11g00956 422 CDD PP2Cc 68 342 IPR001932 -
Rops11g00956 422 SMART PP2C_4 52 340 IPR001932 -
Rops11g00956 422 PANTHER PROTEIN PHOSPHATASE 70 341 IPR015655 GO:0004722|GO:0006470
Rops11g00956 422 Gene3D - 42 344 IPR036457 -
Rops11g00956 422 MobiDBLite consensus disorder prediction 219 239 - -
Rops11g00956 422 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 47 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00956 Rops-Chr11 13646427 13650452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00956 1 347 PP2C-type Phosphatase Gene Family AT3G06270 71.470 5.11e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00956 - - aprc:113872580 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00956 11 13646427 13650452 Rops11g00956 11 13646427 13650452 ECH
Rops2g04806 2 87090378 87093716 Rops11g00956 11 13646427 13650452 PCT