Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00933 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAAATGGAAAACAAGGATTTCATGGGGGCTCGTAAATTTGCCCTTAAGGCTCAGCAGCTGCATCCTGATCTGGAGAATATCGCTCAAATGCTTGTGGTTTGTGATGTGCATTGTTCTGCTGAGCAGAAATTTGGTGATGTGATGGATTGGTATAAAATTCTACAAATTGAGCTGATGGCTAATGATGCAACAATTAAGAAGCAATACAGGAAGTTTGCTCTCCAACTTCACCCTGACAAAAACAAGTTTCCTGGTGCAGAAGCTGCTTTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTTTGGATAGAGAGAAACGATCTTCGTTTGACATGAACTTGCGCAGGTTTCCAATGAACAGAACTGCTATGCCATCCCATCATCAGCAGAAGGTTCCGATGAATTTTAATCCTGTGATGCAAACCAATGTCAGGCCCAATTTCACAAACTTGAATCCTCAGCATCAACAACAGACTAGGCAGCCATCACAGCAGGGCCTTAATGGTGGCCAACCTACTTTTTGGACTGTTTGCTCATTTTGTTCGGTTAGACATGAGTTCTACAGGGAAGTTTTAAATAGATCTCTTCGCTGTCGACATTGCAATAGACCCTTCATTGCATATGAGATCAATGTGGAAAGTACAACACCGGCAACTAATCCAAGCCAGCAAGCTTTTGGCCAGCGGGACTATGGTCCAAATCATGGTGCTTTTAAAGTTGGTGTTGGATCTCAAGGTAATTTGCATACTCACAGGTCCAATACGGAATCTTTTCGGAAGAAAGGCCCTACTTCTAATGTTTCTGTAAAGACAAATGGAAAGAGAAGGAGGAAGCAGGTAGTCAAATCCAGTGAAAGTTCTGATTCTATAGGCAGCAGCAGCACTGATTCCGAAGATGATGATGATGGTTTTGCTGGTGTTTCTACTCATAGAGAAGAGCATCCACGGAGATCTGCACGGCAAAAACACCAGGTTTCCTACAAGGAGAATGTGAGTGATGATGATGATGAGTTATTACAACCTTCAAAACGGGGTAAAGGGAATGGATCACCATGTAGTGATGGTGAAAATCATGGGGAGGCAGCTAAAATGAATGATCAGAATGGTTTGGCTGCTGATCTGAAAGATGATCAGAAAGAGGTAAAGCAGAAGCAGAGTTTTTATTCTGATGAGAGCTTAGAAAATATAAATATGGAAATGAAGGAAGTGAGAGGAAAAGAGGCAGTGGGCAGCTCAAAGATAGATGAAGCTTCGGAGCATTCAACCTCAAAATTGACAAATCATCCGGATGATTTTGTTTATCCTGATGCAGATTTCAGTGACTTCGACAAGGACAAGAAACAGGAATCTTTTGCTGCTGGGCAAATTTGGGCTATTTATGATGAAACAGATGGCATGCCTAGATTCTATGCCTTAATTAGAAAAGTTCTCTCTCCTGGATTCAAGTTGCGGATAACATGGTTTGAGCCAGATCCAGATGACAGTGATGAAATCAATTGGTTAAATGAGCAACTGCCAATTGCTTGTGGGAAATATAAACTTGGTAACACTCAAACCATTGAAGATCATCCGATGTTCTCTCATCTGATTTCTTGTGAAAAGACTGGCCACTGTACTTTTAAAGTGTATCCTAGAAAAGGAGAAACCTGGGCTCTTTTCAAAAATTGGGATATCAACTGGTATATGGATGCAGAATCTCATCAGCAGTTTGATTTTGAGTTTGTTGAGATCTTGTCAGATTATGTTGAAGGTGTGGGAGTAGTTGTTGCATACTTGGCTAAGTTGAAAGGTTTTGTGAGTCTCTTCTCTCAAATTATGAAGGGAGGTCATCACTCATTTCAAATTCCATCAGTTGAGTTATTCAGATTCTCTCACAGGGTTCCGTCTTTCAAAATGACTGGTAAGGAAAGAGTAGGCGTTCCTGTAGGATCTTATGAACTTGATCCTGTATCCATACCAATGAATCTGGAAGAGATTGCTGTTCCTGAAGATTTGGAAGTGACGGTTGGTCATAGTCCATCTCCTGCCAAGTTTAATTTGGAAAGAAGCAATTCTGCAGAGGAGGAGGATCCTGTTGAACATATTGATGATGGTAGTGCTCCATCAGCTTCGGTTGCAGAAGCTTTTGAAATTCCAGATCCACTGTTCTTCAATTTTGATGCTGAGAGGTCCCTTGAAAAGTTTCAGATGGGTCAGATTTGGGCATTTTACGGTGATGAGGATGGACTGCCAAAATACTATGGTCAGATTAAGAGAGTTAGGACGGGCCCAGATCCTGAGTTGCAAGTTACTTATCTTACTAGCTGCTGGCTACCGGAAAATGCTATTAGATGGGAAGATAAGGATATGCTCATTTCCTGTGGAAGATTTAAAATCGAAGCAGGTAGTCGTCCCTGTGTTTATAATAACACCTATTCTGTTTCACATCTGGTTCACACTAATACTGATGGTAAGAATAAGGAATATGACATTTTTCCACGGAAAGGTGAAATTTGGGCATTGTATAGGAAATGGACGACTAAAATCAAACGTTCTGATTTGGAAAACTGGGAGTATGACATGGTGGAAGTAGTTGAAGAAAATGATTTGGGGATGGTTGTTTTGCTTTTGGAGTTGGTAAGTGGTTTTAATTCAGTTTTTAAGGGCAAATCAAATGAAGGAGGATCAGCTAGGACCATGAGAATCTCCAGGAGAGAGTTGCTGAGGTTCTCCCACCAAATACCTGCTTTCAAACTGACTGAAGAACATGGCAATCTGAGAGGCTACTGGGAGCTTGATCCGGGAGCACTGCCCCTTCATTATTTTAGTCACAAATGA 2865 0.4136 MDCNKEEALRAKDIAEKKMENKDFMGARKFALKAQQLHPDLENIAQMLVVCDVHCSAEQKFGDVMDWYKILQIELMANDATIKKQYRKFALQLHPDKNKFPGAEAAFKLIGEAQRVLLDREKRSSFDMNLRRFPMNRTAMPSHHQQKVPMNFNPVMQTNVRPNFTNLNPQHQQQTRQPSQQGLNGGQPTFWTVCSFCSVRHEFYREVLNRSLRCRHCNRPFIAYEINVESTTPATNPSQQAFGQRDYGPNHGAFKVGVGSQGNLHTHRSNTESFRKKGPTSNVSVKTNGKRRRKQVVKSSESSDSIGSSSTDSEDDDDGFAGVSTHREEHPRRSARQKHQVSYKENVSDDDDELLQPSKRGKGNGSPCSDGENHGEAAKMNDQNGLAADLKDDQKEVKQKQSFYSDESLENINMEMKEVRGKEAVGSSKIDEASEHSTSKLTNHPDDFVYPDADFSDFDKDKKQESFAAGQIWAIYDETDGMPRFYALIRKVLSPGFKLRITWFEPDPDDSDEINWLNEQLPIACGKYKLGNTQTIEDHPMFSHLISCEKTGHCTFKVYPRKGETWALFKNWDINWYMDAESHQQFDFEFVEILSDYVEGVGVVVAYLAKLKGFVSLFSQIMKGGHHSFQIPSVELFRFSHRVPSFKMTGKERVGVPVGSYELDPVSIPMNLEEIAVPEDLEVTVGHSPSPAKFNLERSNSAEEEDPVEHIDDGSAPSASVAEAFEIPDPLFFNFDAERSLEKFQMGQIWAFYGDEDGLPKYYGQIKRVRTGPDPELQVTYLTSCWLPENAIRWEDKDMLISCGRFKIEAGSRPCVYNNTYSVSHLVHTNTDGKNKEYDIFPRKGEIWALYRKWTTKIKRSDLENWEYDMVEVVEENDLGMVVLLLELVSGFNSVFKGKSNEGGSARTMRISRRELLRFSHQIPAFKLTEEHGNLRGYWELDPGALPLHYFSHK* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00933 954 Gene3D DnaJ domain 64 176 IPR036869 -
Rops11g00933 954 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 679 - -
Rops11g00933 954 MobiDBLite consensus disorder prediction 158 184 - -
Rops11g00933 954 MobiDBLite consensus disorder prediction 692 715 - -
Rops11g00933 954 SMART dnaj_3 65 122 IPR001623 -
Rops11g00933 954 MobiDBLite consensus disorder prediction 232 378 - -
Rops11g00933 954 MobiDBLite consensus disorder prediction 421 445 - -
Rops11g00933 954 MobiDBLite consensus disorder prediction 421 442 - -
Rops11g00933 954 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Rops11g00933 954 CDD DnaJ 66 119 IPR001623 -
Rops11g00933 954 Pfam DnaJ domain 66 127 IPR001623 -
Rops11g00933 954 Pfam Domain of unknown function (DUF3444) 724 931 IPR024593 -
Rops11g00933 954 Pfam Domain of unknown function (DUF3444) 447 652 IPR024593 -
Rops11g00933 954 PRINTS DnaJ domain signature 68 86 IPR001623 -
Rops11g00933 954 PRINTS DnaJ domain signature 86 101 IPR001623 -
Rops11g00933 954 PRINTS DnaJ domain signature 102 122 IPR001623 -
Rops11g00933 954 MobiDBLite consensus disorder prediction 319 358 - -
Rops11g00933 954 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00933 Rops-Chr11 13239035 13244071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00933 4 262 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.962 1.59e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00933 - - gmx:100779228 1432.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00933 11 13239035 13244071 Rops11g00933 11 13239035 13244071 ECH
Rops2g04820 2 87304789 87309371 Rops11g00933 11 13239035 13244071 PCT