Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00932 ATGAATCAGTACCATATCTACGAAGCCATTGGTCGCGGCAGATACTCCACCGTGTATAAAGGCAGGAAGAAGAAGACCATTGAGTATTTCGCCATCAAAAGCGTCGATAAGTCGCATAAAAACAAGGTTCTTCACGAAGTCAAGATTCTTCACTCTTTAGATCACAAAAATGTGCTCAAGTTTTATTCTTGGTATCAAACTTCAGCTCACCTATGGTTGGTTTTGGAATATTGTGTTGGAGGTGATCTACTTTCCATATTACGGCAGGATAGTCGACTTCCTGAAGATTCAGTTCATGATCTTGCTTGTGACCTAGTCAAAGCTTTACAGTTTTTACATTCAAATGGAATAATTTATTGTGATCTGAAACCATCAAATATCCTACTAGATGAAAATGGATGTGCAAAGCTATGTGATTTCGGATTGGCTAGAAAGTCGCAAGATATATCAAAAACACCTTCTTCCTCGTTGCCTCAAGCAAAACGTGGAACACCCTATTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAATCCATTCTTATGCTTCTGATTTTTGGGCCCTAGGTTGTGTACTATATGAATGTTATGCTGGGAAACCTCCTTTTGTGGGAAGAGAATTCACTCAGCTTGTAAAATCCATCATTTCAGATCCGACTCCGCCTCTCCCTGGCAACCCAAGTCGACCTTTTGTCAATTTAATTAATTCTCTGTTGGTAAAAGATCCAGCTGAAAGAATACAATGGCCCGAGCTTTGTGGACATGCCTTTTGGAAAACCAAATTTACTCTGGTGCCTCTGCCTCCTCAACCTGAGTTTGATGATATGCTAGAGCTACATGCTAAACCATGCTTATCAGAACGTAATAGAGATAAATCTCCTCATAACAGGACCCCTCCCAAATATCGTGAAAAAGATGTGAAAGGGGTGTTAAAGAAGGATGAGAATTCTGTTTTAGGATCTAGAGGTATTGAGACACCAACAAGGGCAACACCAAATGGTCACAGAACTCAGACAAAGGGTTCTGGCAGAACAACTGAGGTGAAGCAGAAAGATCCTTCCAATATTAACAGGGGTGTGAATCTTTTGAGACTGTCTAGAATAGCAAAATCAAATTTACAGAAAGAAAATGAGAAAGAAAACTATCGTCGCCCCTTGCCTAATAGTTCTGAGAATGATTCTGAAGTAAAAATCGAGAATCCTGACATGGAACTTGATTTTAATGAGAACAGTGAAGATGACGCACATGAAGAAACTGATGGCTCTGAACATACGACTTCTGTGCCTGATGAGAAAATGGACAATCATTTTCAGAATCAAGGAAAAGCAGAGGAGATTGAAAATAATGTGCACCAGTTGGACACTCCATCTCTTGTTAACACTCCTGTCTCAGATGATCCAAGGTCATTCGATCACGAGTTAACTCCTGGCCGTCCAGACATATCTGCTATATCTCCCAGTGTGAGCCCTCTAGTGAAGAAACATAAACCAAAAGAAGACTCAGGATCCGGCCTTGACTCTGATTCTTCAAGGTTTTCCAACAACCTTTCCCAGGTCTTTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATGCCCAGCAGAAAAGTTGATAAAGTCTCAGAAGTCACTCCTTCACTTCCTTTCGAGGCGTTGCAAGCACCTGATTTTGTCAAGATGCCTAAGGAGCAATTGGAGGCAGTCCACAATCGAATTATAGCCATTTTGAATGGAAATACCAGCATTGGAGAGAAACAAAATGTAATTAGGTACCTCGAGATGTTGAGCAGTAATGCTGATGCAGCCAACATCTTAACCAATGGGCCAATAATGCTCATACTTGTAAAACTGCTACGTCAATCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCACTGATCGGTCTGTTGATTCGGCACTCTACTTTTATTGATGACAGTTTGGCTAATTCTGGAATTTTAGGTTCACTAACGGATGGCCTTAGAGACAAGCAGGAGAAAGTGAGAAGGTTTTCCATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCCACCCAGAATGTGGACTGCAGGGATAACAATCCACTTGAATCTCCATCAAAGGACAATAGGACTACGAATGGCTGGCAGGTTTCAAATTCATTAATTTCCTTCGTTTCATCAATGTTGAGGAAGGGTGAGGATGATATTACCCAATTGTATGCTTTGAGAACAATTGAGAATGTTTACAGTCAAGGAGTTTTCTGGGTGGGACGTTTGACCAGTCAAGATGTTATCCGTAATCTGTGCTATATCTATAGGGCAGCAGGGAAACAAGAGAGCATGAGGCTTACTGCAGGATCATGTTTGGTGCGCTTGGTTCGTTTTAATCCTCCTAGCATTCAGTCAGTCATTGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAGGGCAGTCCACGAGAGCAACAAATCAGCTTAAATCTTCTCAACATGGCAATGCTTGGAAGTCATATGTTCACAAGTATGGGAAAATACCTTGCACCCCTTGCCGAGGATAAGAATCTTATCCCAAGTCTTTGGGCTCTTGTTGAGCAGGGTAGTGAAGTTTTAAAAGGAAAGGCCCTTGTCTTTGTGGCCCTCCTCTGTAAGCACGGTAGGAGGTGGCTTCCACACTTCTTTTGTAGCCAAAGGTTACTTTCCGTGGTGGACAGGCTGGGAAAAGAGAAGGATGCTTATGTGCGGCAGTGTTTAGATGCATTTGTGCATATTGTGGCATCTACTATTCCAGGTTTACTGGATCTAATAACAGGGGATATCCAACAAATGATGGGAGGAAGGCGCCATGGACATGCCCTAACCAGCAGATCTGCTCCAAAAAACAACATTCATTTGTTTCCGGTTGTCCTTCATCTTCTTGGAAGCTCAACTTTTAAGCACAAAGTGGTGACACTCCAAGTCCTACGGCAGTTGGCAAATCTAATTAAACTCGTGGAGACACCGTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGTATTTTGGAGTCTATTACGGAGGAATCTCCTGTGATTCTTGGCAATCCTGACATTTTCATCCGTGAAATCCTCCCAAGTTTGACGGTTCTCTATAAGGGTAACAAGGATGGTGATGCCAGATTTTTGTGCCTTAAAATTCTTTTCGATGTGATGATTATTCTTTTGAGTGAACCAATTGAAGAAGAGCAAAGATTGAAGGATTTGAAATTCATATCAAATACACGTTTTCTTCCTCTCTACCCGAACTTGATCGAAGATGAAGATCCTATTCCTATCTATGCACAGAAGCTTCTTGTCATGCTACTGGAGTTCAGTTTTATTACAATTCCAGACATTCTACATCTGAAGACAATTTCGCAATGCTTTGAGTTCTTGCTTGGTGACCTATCAAATGCAAATGTGAACAATGTTAAGCTATGTCTTGCTCTGGCTTCTGCTCCTGAAATGGAGTCCAAGTTACTCTCTCAATTGAAAGTAGTCAGGAAGATTGGAAACTTTCTTGAGTTTATTTGCGCAAAGGGTATGGAAGATTTGCTAGAACCCACTCTTGGACTGTGTAGGGCTTTTCTAGCTCGTTCAGTGAGCTGTGCAAAAGGTTTCAGCTACACAACAGAGCCAACTCTCTTAGGTGACTGTCCTCCCGAGGTGAGTGGTGCTGTTGATCCCCAGCAATGCATAAGAGATATAGCTGACTTTGGAAGCAATGTTGGTGTCTTGCTAGAGTTGAGTGCCTCTACAGAAACCAATATTGCTGATATAGCTTCTGAATGTGTAGTTTTACTGCTTAAGGCAGCTCCTAGAGAAGCCACCACTGGTTTACTAACCAATCTCCCCAAGGTCAGTATGATCCTAGAGTCCTGGAATAGAGGCACCCCTCACTTAATGGTGCAGCGAATGCTTCATGCTTTAGGTTATGCTTGCAAGCAGTACTTATTGCATGCAATGATATTATCAATATCTAAACCAGAGATTTCAAGAATTGAGGTGATAGTTTCTGAAATCAAAAGTTCAGGTGTGCCTGCTTTAGCCAAAACTGCTGGGCTGGCAGCCTTGGAATTGCAGCGGCTGCCTCGATGCATTTGA 4107 0.4215 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSHKNKVLHEVKILHSLDHKNVLKFYSWYQTSAHLWLVLEYCVGGDLLSILRQDSRLPEDSVHDLACDLVKALQFLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKSQDISKTPSSSLPQAKRGTPYYMAPELFEDGGIHSYASDFWALGCVLYECYAGKPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWKTKFTLVPLPPQPEFDDMLELHAKPCLSERNRDKSPHNRTPPKYREKDVKGVLKKDENSVLGSRGIETPTRATPNGHRTQTKGSGRTTEVKQKDPSNINRGVNLLRLSRIAKSNLQKENEKENYRRPLPNSSENDSEVKIENPDMELDFNENSEDDAHEETDGSEHTTSVPDEKMDNHFQNQGKAEEIENNVHQLDTPSLVNTPVSDDPRSFDHELTPGRPDISAISPSVSPLVKKHKPKEDSGSGLDSDSSRFSNNLSQVFWHPSDLSVRPVMPSRKVDKVSEVTPSLPFEALQAPDFVKMPKEQLEAVHNRIIAILNGNTSIGEKQNVIRYLEMLSSNADAANILTNGPIMLILVKLLRQSKASALRVQLASLIGLLIRHSTFIDDSLANSGILGSLTDGLRDKQEKVRRFSMAALGELLFYISTQNVDCRDNNPLESPSKDNRTTNGWQVSNSLISFVSSMLRKGEDDITQLYALRTIENVYSQGVFWVGRLTSQDVIRNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPPSIQSVIEKLSFKDLASALVKGSPREQQISLNLLNMAMLGSHMFTSMGKYLAPLAEDKNLIPSLWALVEQGSEVLKGKALVFVALLCKHGRRWLPHFFCSQRLLSVVDRLGKEKDAYVRQCLDAFVHIVASTIPGLLDLITGDIQQMMGGRRHGHALTSRSAPKNNIHLFPVVLHLLGSSTFKHKVVTLQVLRQLANLIKLVETPFQGRDDFQITLLRILESITEESPVILGNPDIFIREILPSLTVLYKGNKDGDARFLCLKILFDVMIILLSEPIEEEQRLKDLKFISNTRFLPLYPNLIEDEDPIPIYAQKLLVMLLEFSFITIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRKIGNFLEFICAKGMEDLLEPTLGLCRAFLARSVSCAKGFSYTTEPTLLGDCPPEVSGAVDPQQCIRDIADFGSNVGVLLELSASTETNIADIASECVVLLLKAAPREATTGLLTNLPKVSMILESWNRGTPHLMVQRMLHALGYACKQYLLHAMILSISKPEISRIEVIVSEIKSSGVPALAKTAGLAALELQRLPRCI* 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00932 1368 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1365 IPR044591 GO:0000911|GO:0000914|GO:0008017
Rops11g00932 1368 Gene3D Transferase(Phosphotransferase) domain 1 1 303 - -
Rops11g00932 1368 MobiDBLite consensus disorder prediction 320 360 - -
Rops11g00932 1368 FunFam Aurora kinase A 1 81 - -
Rops11g00932 1368 SUPERFAMILY ARM repeat 557 1196 IPR016024 -
Rops11g00932 1368 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00932 1368 MobiDBLite consensus disorder prediction 416 434 - -
Rops11g00932 1368 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00932 1368 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00932 1368 CDD STKc_ULK4 3 257 - -
Rops11g00932 1368 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Rops11g00932 1368 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Rops11g00932 1368 Gene3D - 695 1081 IPR011989 -
Rops11g00932 1368 MobiDBLite consensus disorder prediction 283 318 - -
Rops11g00932 1368 MobiDBLite consensus disorder prediction 370 385 - -
Rops11g00932 1368 Gene3D - 561 692 IPR011989 -
Rops11g00932 1368 MobiDBLite consensus disorder prediction 283 434 - -
Rops11g00932 1368 MobiDBLite consensus disorder prediction 453 508 - -
Rops11g00932 1368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00932 Rops-Chr11 13208854 13215779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00932 1 246 AGC Kinase Gene Family AT3G08730 34.127 1.79e-36 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Rops11g00932 Pkinase 4.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00932 K17545 - gmx:100817590 2437.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00932 11 13208854 13215779 Rops11g00932 11 13208854 13215779 ECH