Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00921 ATGGGGTGTGTGTTTGGGAAAGAGTCTTCAGTGGAGGAGAGGAGAGAGGAAGTGAGAGAAGCAAAAGCAAAAGCAGATGTGGGTGGAGGAGAGGTTCAAAATGAGAAAGAGGATGGTGGAAGAGAGGAGAAGAGGACAAGGCCAAGTGGAGAGAGAAGAAGAAGATCTTCGAAGCCAAATCCAAGGTTGAGTAATCCACCTAACAATATTCATGGTGAGCAGGTAGCAGCAGGGTGGCCCTCTTGGCTCTCCAAGGTTGCTGGTGAAGCTATCAATGGATTGACTCCTAGGAGGGCTGACACTTTTGAGAAGCTTGATAAGATTGGGCAAGGTACATACAGCAATGTTTACAAAGCTAGGGATAGTTTAACGGGGAAAATTGTTGCCCTAAAGAAGGTTCGTTTCGACAATTTAGAGCCCGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTGATTCTGCGTCGTCTGGATCATCCTAATGTTGTCAAACTGGAAGGCTTAGTGACTTCTAGAATGTCATGCAGTTTATATCTTGTGTTTGAATACATGGTGCATGATCTGGCTGGACTTGCTACAAACCCTGCCATTAAGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAGCTATTTTCTGGGCTGGAACATTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTTATTGACAATGATGGAATTCTTAAGATTGCCGATTTTGGATTAGCTTCCTTCTTTGATCCCGATCACAAGCACCCAATGACCAGTAGAGTGGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTAGGGGCCACTGAATATGGTGTAGGGGTGGACCTCTGGAGTGCTGGTTGCATTCTTGCTGAATTGTTGGCTGGAAAGCCTATTATGCCTGGTCGAACAGAGGTGGAGCAGTTACATAAGATATTTAAGTTATGTGGTTCTCCTTCTGAAGAATATTGGAAAAAGTCAAAGTTGCCACATGCTACCATTTTTAAGCCCCAACAGTCATACAAGCGATGCATAGCAGAGACTTTTAAGAATTTTCCACCATCATCTCTGCCACTAATTGAGACCCTCCTCACAATTGATCCGGCTGAACGTCTGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAACCGTATGCTTGTGAGCCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGGTTGAGAGCAGCTGGAAAAGCTAATGCTGATGGTGTCAAGAAATCTCGTCCACGTGAGCGAGTTGGGAGGGGAATTCCAGTTCCAGAGGCCAATGCTGAACTGCAAGCAAATATTGATAGACGGCGACTGATCACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAGCTCTAGGCTATCCTTTGGGTTCTTCACATCACATGGATCCAGTTTTTGATCCTCCTGACATCCCGTTTAGCTCCACAAACTTCTCACTACCTAAATCAAATATCCAAACCTGGTCCGGTCCATTGATAGATCCTGGTGGTCTGGGTGCACCAAGGAGAAAGAAGAAACATGGCAGGAGTATTCATGAAGCTGCAAATGTTGCTTACTTGATGTCTCACATCTGGTTGGTATTGGAGGTAAACTATATTGTATTTCCTGCTCCCAAGTTCTTTCTCAATGATCAGAGAATGAGAGCACAAGGAGGACCTGGGCCTCCGGGCAGCCCAGGTTCATGGCCCGGACCACCTTCTGTTCTTGGCAACTTCTTCCATGGACTCTCTAATACCATATCTTCTTGTTTCTACATGGTTTGCTGTTGTTGGTTGCTACAAGACTGTTTTGGTGCGTCACCACCAGAACCACAACCCGTTCCATCGGCGCCGCCGCCACAACCTCCACCGCCTGTGCCTGGCCCACCACCACCAGTACCTCCTGCTCCTCCTGGGCCTCCTGCTGGCCCATTTTGGCCTCCCAGTGGCCCACCTGGTCCTCCCATTCCACCACCACCACCTGGGCCTCCTGGGCCCCTAGGCGGCCCACCCGGACCTCCACCTCCTTATTAA 2106 0.4777 MGCVFGKESSVEERREEVREAKAKADVGGGEVQNEKEDGGREEKRTRPSGERRRRSSKPNPRLSNPPNNIHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDSLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTEPQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGILKIADFGLASFFDPDHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKNFPPSSLPLIETLLTIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVKKSRPRERVGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDIPFSSTNFSLPKSNIQTWSGPLIDPGGLGAPRRKKKHGRSIHEAANVAYLMSHIWLVLEVNYIVFPAPKFFLNDQRMRAQGGPGPPGSPGSWPGPPSVLGNFFHGLSNTISSCFYMVCCCWLLQDCFGASPPEPQPVPSAPPPQPPPPVPGPPPPVPPAPPGPPAGPFWPPSGPPGPPIPPPPPGPPGPLGGPPGPPPPY* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00921 701 Gene3D Phosphorylase Kinase; domain 1 90 184 - -
Rops11g00921 701 CDD STKc_CDK9_like 102 386 - -
Rops11g00921 701 MobiDBLite consensus disorder prediction 633 701 - -
Rops11g00921 701 Gene3D Transferase(Phosphotransferase) domain 1 185 425 - -
Rops11g00921 701 SUPERFAMILY Protein kinase-like (PK-like) 97 391 IPR011009 -
Rops11g00921 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Rops11g00921 701 ProSiteProfiles Protein kinase domain profile. 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00921 701 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Rops11g00921 701 SMART serkin_6 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00921 701 MobiDBLite consensus disorder prediction 1 74 - -
Rops11g00921 701 PANTHER CELL DIVISION PROTEIN KINASE 100 390 - -
Rops11g00921 701 MobiDBLite consensus disorder prediction 8 58 - -
Rops11g00921 701 MobiDBLite consensus disorder prediction 421 441 - -
Rops11g00921 701 FunFam probable serine/threonine-protein kinase At1g54610 185 426 - -
Rops11g00921 701 MobiDBLite consensus disorder prediction 467 501 - -
Rops11g00921 701 Pfam Protein kinase domain 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00921 701 FunFam probable serine/threonine-protein kinase At1g54610 89 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00921 Rops-Chr11 13135547 13141845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00921 97 424 Core Cell Cycle Gene Families AT5G10270 52.326 8.79e-118 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Rops11g00921 Pkinase 9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00921 K08819 - gmx:100779413 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04829 2 87434295 87438779 Rops11g00921 11 13135547 13141845 PCT