Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00915 ATGGTGGAGGCGAACCTCGAACCCATTCCAGGCAAGTCTACAGTCTCCAAATACATAACTATCAATGAAGAGAATCATGTATGGGTTCAAATTTATAGGCTAACAAAGCTTCCTTCCAATGACAACACGGTGGCACTCTTCGTTACTTGCCGCCATGCACCGAAGAGCCGCCTCCCGGCACAATACTACGATGCCCGTGATGCCATATTGTGGGTGAGGAAACAAATTACTTATCTTAATGGTGAGCAATGGTTGAGAGACTACGGTGACCCTTCGAGGTGTTACCTTTATGGATGTGACAGTGGTGGAAACATAATGTTCAACACTGCCATGCTAGTTGCTGATATGGAGTCAGAGCCTGTGAGAATATGTGGGGTGATCATGAACCAACCCATGTTGGAGTCACAATGA 411 0.4623 MVEANLEPIPGKSTVSKYITINEENHVWVQIYRLTKLPSNDNTVALFVTCRHAPKSRLPAQYYDARDAILWVRKQITYLNGEQWLRDYGDPSRCYLYGCDSGGNIMFNTAMLVADMESEPVRICGVIMNQPMLESQ* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00915 136 Gene3D alpha/beta hydrolase 1 136 IPR029058 -
Rops11g00915 136 Pfam alpha/beta hydrolase fold 42 133 IPR013094 GO:0016787
Rops11g00915 136 PANTHER ARYLACETAMIDE DEACETYLASE 35 133 - -
Rops11g00915 136 SUPERFAMILY alpha/beta-Hydrolases 31 133 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00915 Rops-Chr11 13082940 13083464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00915 34 136 Carbohydrate Esterase AT1G19190 34.906 1.11e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00915 - - gmx:100818565 156.377