Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops11g00912 | ATGGCGAGACCTTCGAAGCCACAAGTTTCTTCCGACGAAGCATTCTCCAACGCTTCAAGTTCATCAGAGGAAGAGCAAGTCAATGAACAAATCAACGAAGAAGAAGACGAGGAGGAGTTGGAAGCGGTGGCACGCTCTGCTAGTTCCGACGATGATGAAGTCGCCGAGGACAATTCTCCAGATTCTGAAGAAGATCCTGCCGCCGCTGAAGATGGTGACGACGAGGAACAGGGTGGAGATCATGTTGATCCTGAAATTAGCAAGCGTGAGAAGGCTAGATTAAAGGAAATGCAAAAAATGAAGAAACAGAAGATTCAGGATATTTTGGATGCGCAGAATGCAGCCATTGATGCTGACATGAACAATAGAGGAAAGGGGCGTCTGAAGTATCTCTTACAGCAGACTGAGCTGTTTGCTCATTTTGCAAAAGGTGATCAATCTTCATCTCAAAAGAAGTCACGGGGAAGGGGCCGTCATGCATCAAAAGTAACTGAAGAAGAGGAAGATGAAGAATACCTAAAAGAAGAAGAAGATGGTGTAGCAAGCACACGTCTAGTGACACAACCATCATGTATCCAAGGAAAGTTGAGGGATTACCAACTGGCTGGACTAAACTGGCTTATACGATTGTACGAGAATGGAATAAATGGAATTCTAGCTGATGAAATGGGGCTTGGTAAAACATTGCAAACTATATCTTTATTGGGTTATTTGCACGAGTTCAGAGGAATCAAAGGCCCTCATATGGTGGTTGCTCCAAAATCTACTCTTGGAAATTGGATGAATGAGATTCGACGCTTTTGTCCTATTTTGCGTGCAATAAAGTTCCTTGGCAACCCTGATGAAAGGAGACATATAAGAGAGGAATTGTTGGTTGCTGGGAAATTTGATGTTTGTGTTACAAGTTTTGAAATGGCTATCAAAGAGAAGTCTGCTTTGCGTCGATTTAGTTGGCGCTACATAATTATTGACGAAGCTCATCGAATCAAGAATGAGAATTCCTTGCTGTCCAAAACAATGAGGCTCTACAATACAAACTATCGCCTTCTTATTACTGGCACACCACTTCAGAATAATCTTCATGAACTATGGTCTCTTCTCAACTTTCTTCTGCCCGAAATTTTTAGTTCTGCCGAAACATTTGATGAATGGTTTCAAATCTCTGGTGAAAATGATCAACAGGAGGTTGTTCAACAATTACACAAGGTCCTCCGACCATTTCTCCTTCGAAGGTTGAAGTCAGATGTTGAGAAAGGGTTGCCACCTAAAAAGGAAACCATTCTTAAAGTAGGCATGTCACAAATGCAGAAACAGTATTATAGAGCCCTATTGCAGAAGGATCTTGAGGTTGTTAATGCTGGTGGAGAACGGAAGCGTCTCCTGAATATAGCCATGCAACTACGCAAATGTTGTAATCATCCATATCTTTTCCAAGGGGCTGAACCTGGTCCTCCCTATACAACAGGAGATCATCTCATTACAAATGCTGGTAAAATGGTTCTTTTGGATAAGTTACTTCCAAAACTGAAAGAACGCGATTCTAGGGTCCTCATATTTTCACAGATGACTAGGCTGCTAGACATACTCGAAGATTATTTAATGTTTCGTGGATATCAATATTGTCGTATTGATGGCAATACTGGGGGGGATGATCGTGATGCCTCCATTGATGTTTTCAACAAACCAGGAAGTGAGAAATTTGTCTTCTTGTTATCAACTCGGGCTGGAGGTCTTGGTATTAATCTTGCTACTGCTGATGTCGTCATTCTTTATGATAGTGACTGGAACCCACAAGTTGACTTGCAGGCTCAGGATCGTGCTCATAGGATAGGTCAAAAGAAAGAAGTTCAAGTTTTCCGTTTTTGCACTGAGTATACAATTGAGGAGAAAGTCATTGAAAGGGCTTACAAAAAGCTTGCACTTGATGCTCTGGTGATTCAGCAAGGTCGATTAGCTGAGCAGAAGACGGTAAATAAAGATGAGTTGCTTCAAATGGTTAGATTTGGGGCTGAAATGGTTTTCAGTTCCAAGGACAGTACAATTACAGATGAGGATATTGATAGAATTATTGCTAAAGGAGAGGAGGCAACTGCTGAGCTTGATGCCAAGATGAAGAAATTTACTGAAGATGCAATCAAATTTAAGATGGATGACACTGCTGAGTTATATGATTTTGATGATGAGAAGGATGAGAACAAATTTGATTTCAAAAAAATTGTGAGTGAAAACTGGATTGAACCACCAAAAAGAGAGCGGAAGCGCAATTACTCGGAGTCTGAATACTTCAAGCAAACAATGCGCCAAGGTGGTCCTACTAAACCAAAAGAGCCCCGTATTCCTAGGATGCCCCAGCTGCATGATTTCCAGTTTTTCAATACACAAAGGCTGAGTGAGCTGTATGAAAAGGAAGTTCGCTATCTCATGCAGACACATCAGAAGAATCAGATAAAGGACTCAATAGATGTTGATGAACCAGAAGAGGTGGGAGATCCATTGACTGCTGAAGAGTTGGAAGAAAAGGAACGCCTGCTAGAAGAGGGATTTTCGTCATGGAGCCGGAGAGATTTTAATACTTTCATTAGGGCCTGTGAAAAATATGGCCGAAATGATATAAAAAATATTGCTTCTGAGATGGAAGGAAAAACTGAGGAGGAAGTTGAAAGATATGCAAAGGTCTTCAAAGAAAGATACAAGGAATTAAATGATTATGATAGAATTATTAAAAACATTGAGAGGGGGGAGGCTAGAATTTCTCGAAAAGATGAGATCATGAAAGCTATTGGGAAGAAGTTGGACCGTTACAAGAATCCTTGGCTAGAGTTGAAGATACAGTATGGACAAAATAAAGGGAAATTATACAATGAAGAATGTGACAGATTCATGATATGCATTGTTCACAAACTTGGCTATGGGAACTGGGATGAGCTGAAGGCAGCATTTCGAACATCACCTTTGTTTAGGTTCGATTGGTTTGTTAAGTCTCGCACAACACAGGAACTTGCCAGGAGGTGTGACACCCTCATTCGGCTGGTAGAAAAAGAAAACCAAGAATATGATGAGAGGGAGAGACAAGCTCGCAAAGAGAAGAAACTTGCCAAGAGCATGACCCCATCAAAGCGTGCTTTGGCAAGACAGACAGAGGGTCCATCTTCTTTGAAGAAGCGCAAACAGTTAACTATGGATGATTATGCTAGCACGGGGAAGAAGAGAAAATAA | 3216 | 0.4123 | MARPSKPQVSSDEAFSNASSSSEEEQVNEQINEEEDEEELEAVARSASSDDDEVAEDNSPDSEEDPAAAEDGDDEEQGGDHVDPEISKREKARLKEMQKMKKQKIQDILDAQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGDQSSSQKKSRGRGRHASKVTEEEEDEEYLKEEEDGVASTRLVTQPSCIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAIKFLGNPDERRHIREELLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYQYCRIDGNTGGDDRDASIDVFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDEKDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQIKDSIDVDEPEEVGDPLTAEELEEKERLLEEGFSSWSRRDFNTFIRACEKYGRNDIKNIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICIVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRALARQTEGPSSLKKRKQLTMDDYASTGKKRK* | 1072 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops11g00912 | 1071 | Gene3D | - | 935 | 1038 | - | - | |
| Rops11g00912 | 1071 | Gene3D | - | 197 | 412 | IPR038718 | - | |
| Rops11g00912 | 1071 | SUPERFAMILY | Homeodomain-like | 902 | 1024 | IPR009057 | - | |
| Rops11g00912 | 1071 | Pfam | HAND | 760 | 842 | IPR015194 | GO:0003677|GO:0006338|GO:0031491 | |
| Rops11g00912 | 1071 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 413 | 694 | IPR027417 | - | |
| Rops11g00912 | 1071 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 208 | 373 | IPR014001 | - | |
| Rops11g00912 | 1071 | MobiDBLite | consensus disorder prediction | 81 | 99 | - | - | |
| Rops11g00912 | 1071 | MobiDBLite | consensus disorder prediction | 1019 | 1071 | - | - | |
| Rops11g00912 | 1071 | SUPERFAMILY | HAND domain of the nucleosome remodeling ATPase ISWI | 759 | 849 | IPR036306 | GO:0003677|GO:0006338|GO:0031491 | |
| Rops11g00912 | 1071 | SUPERFAMILY | Homeodomain-like | 850 | 900 | IPR009057 | - |
Showing 1 to 10 of 43 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops11g00912 | K11654 | - | gmx:100782649 | 1930.61 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Rops11g00912 | 11 | 13061175 | 13070284 | Rops11g00912 | 11 | 13061175 | 13070284 | ECH | |
| Rops2g04837 | 2 | 87546131 | 87554840 | Rops11g00912 | 11 | 13061175 | 13070284 | PCT |
Showing 1 to 2 of 2 entries