Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00904 ATGTGCCAAAATTTCATCACTTTTGCTGGTTTGAGCCCTGAGGACACTGTGCTTACATGGAACAACACTTCCTCCAGAATCGATCACCACCAAGGTTCAGGACAGGCAGTCGCAATTAGAGTAATAGCAGATCGATGTGCCATCTACAATTGCAGGTTCCTTGGATGGCAGGACACACTGTACTTACATTATGGCAAACAATATTTGAAAGATTGCTATACTGAAGGAAGTGTGGACTTCATCTTTGGCAATAGCACCGCTCTTTTGGAGCACTGTCATATCCACTGCAAGTCTCAAGGGTTCATAACTGCACAGAGTAGAAAATCATCACAGGAAACAACTGGTTATGTATTCTCGAGATGTGTTATCACAGGTAATGGAGGAAATTCATACGCATATCTTGGACGACCATGGGGTCCTTTTGGAAGGGTGGTCTTTGCCTACACTTACATAGATCAATGTATAAAGCATGTTGGCTGGGATGACTGGGGGAAGATTGAGAATGAGAGAAGTGCATGCTTCTATGAATACAGGTGTTTTGGACCCGGTTGCTGTCCATCTAAACGAGTAACATGGTCTAGAGAATTGATGGATGAAGAATCAGAGCAGTTCCTCATGCACCCTTTCATTGATCCAGAACCAGATAGACCTTGGCTTGCTCAAAGAATGGCCTTGAGGATTCCATATTCTGCTTAG 696 0.4368 MCQNFITFAGLSPEDTVLTWNNTSSRIDHHQGSGQAVAIRVIADRCAIYNCRFLGWQDTLYLHYGKQYLKDCYTEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSSQETTGYVFSRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYIDQCIKHVGWDDWGKIENERSACFYEYRCFGPGCCPSKRVTWSRELMDEESEQFLMHPFIDPEPDRPWLAQRMALRIPYSA* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00904 231 Gene3D - 16 226 IPR012334 -
Rops11g00904 231 Pfam Pectinesterase 33 211 IPR000070 GO:0030599|GO:0042545
Rops11g00904 231 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 213 - -
Rops11g00904 231 SUPERFAMILY Pectin lyase-like 4 217 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00904 Rops-Chr11 12952700 12960637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00904 35 224 Carbohydrate Esterase AT5G47500 40.415 1.45e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00904 K01051 - gmx:100795636 444.506