Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g00901 | ATGGGTAGAGACAGATCATCACAGTATATGGTGGTGATTGTAGGGGCAGCAACAACTGTAATTGTGATGAAATTGGTGAGCCTTGTGGCTGCAGTAATCATGGTGGAGGTGGAATTGGCTACTGCAGCAGGAGGCAATGGTGACAACAGTGGCAGTGGTAATGGAGGAAATTCATATGTATATCTTGGACGGCCGTGGGGACCTTTTGGAAGGGTGGTCTTTGCCTACACTTATATGGATCAATGTATAAGGCATGTTGGCTGGGATAACTGGGGGAAGATTGAGAATGAGAGAAGTGCATGCTTCTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCATCCAAACGAGCAACATGGTCTAGAGAATTGATGGATGAAGATGCAGAGCAGTTCCGTATGCATCCTTTCATTGATCCAGAACCAGATAGACCTTGGCTTGCTCAAAGAATGGCCTTGAGGATTCCATATTCTGCTTAG | 480 | 0.4583 | MGRDRSSQYMVVIVGAATTVIVMKLVSLVAAVIMVEVELATAAGGNGDNSGSGNGGNSYVYLGRPWGPFGRVVFAYTYMDQCIRHVGWDNWGKIENERSACFYEYRCFGPGCCPSKRATWSRELMDEDAEQFRMHPFIDPEPDRPWLAQRMALRIPYSA* | 160 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g00901 | 159 | SUPERFAMILY | Pectin lyase-like | 47 | 145 | IPR011050 | - | |
Rops11g00901 | 159 | Gene3D | - | 40 | 154 | IPR012334 | - | |
Rops11g00901 | 159 | PANTHER | ACYL-COA THIOESTER HYDROLASE YBHC-RELATED | 41 | 141 | - | - | |
Rops11g00901 | 159 | Pfam | Pectinesterase | 57 | 139 | IPR000070 | GO:0030599|GO:0042545 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g00901 | Rops-Chr11 | 12940594 | 12942221 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops11g00901 | 56 | 152 | Carbohydrate Esterase | AT5G47500 | 37.755 | 4.89e-17 | 75.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops11g00901 | K01051 | - | gmx:100795636 | 227.254 |