Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00892 ATGTTTTGTTACTGTCGCAGAGCACTGCTCTGCCCCAACATTAACCCCAATCTCAACCCCATCATCCCCTCTCTTCTTCTTCTTCTTCTTCTTAAACCCTTTTCATCTTCCAAAGAAAAACACTCTTTTACCTTCAATTACCTTGTCAACAATTGTGGGTTTTCCCCAGAAACCGCTTCCAAACTCTGCCACCGAGTTCATCTTAAGAACTCAGACAGACCCGACTCGGTCCTTGCCTTGTTCAGAAGCCACGGCTTCTCAAACTCTCAGTTATCTAGAATCATCCGAACCTACCCAAAGCTTCTTTCTTTCGATCCCAACAAGACCCTTCTTCCCAAGTTCAATTTCTTTCTCTCAAAGGGTGCTTCAAGTTCAGACCTTGTGCACATCGTGACCAAGAATCCCCTTTTCTTGGAACAAAGCTTGGAGAAAACCATCACCCCATGTTATGATTTCGTAAAAAGATTCTTGCTTTCTGATAAATCCACCATTCACTCTGTAAAATCATGCGCTTGCGTGCTTTATTCTAATGACACAGCACATAATATTCAACTGCTGCTTGAGAATGGGGTCCCTGAATCAAACGTTGCTTTTTTGTTTCGTCATTGGTGTTACTCAGTGGCCGCTGAGCATCGTGCTATCTTTGAGAAAGCAGTGGAAGAAGTAAAAGCATTGGGATTCAAACCCCACACAACATATTTTATTGTAGCAGTGCGTGCTAAGACGATAAGTGAATCCCTATGGCAAAGGAAGATTGATTTGTATAAGAAATGGGGTTGGTCTGAGGAAATTGTTGCTTCAGCTTTTGTGAGGTATCCATGGTGCATGCTGGCATCTGAGGATAAAATTGAGGCAGTGATGGAGTTTTGGGTCAACCACATGGGTTGGGAGTCTCTGAAGCTTGCCAAATACCCAATACTTCTTACGATGAGTTTGAAGAAAAGAATTATTCCCAGGGCTTTTGTCTTGCAATTTCTTCAATCAAAAGGTTTGATTAAAGATGCTCAATTGATCACACCTTTCAAATTTTCTGAAAAGACGTTCTTGCAGAAATTTGTGAGTCGCTTTGAGGAGGAAGCTTCTCAGCTATTGAAGCTGTATGATGAGAAATAA 1113 0.4178 MFCYCRRALLCPNINPNLNPIIPSLLLLLLLKPFSSSKEKHSFTFNYLVNNCGFSPETASKLCHRVHLKNSDRPDSVLALFRSHGFSNSQLSRIIRTYPKLLSFDPNKTLLPKFNFFLSKGASSSDLVHIVTKNPLFLEQSLEKTITPCYDFVKRFLLSDKSTIHSVKSCACVLYSNDTAHNIQLLLENGVPESNVAFLFRHWCYSVAAEHRAIFEKAVEEVKALGFKPHTTYFIVAVRAKTISESLWQRKIDLYKKWGWSEEIVASAFVRYPWCMLASEDKIEAVMEFWVNHMGWESLKLAKYPILLTMSLKKRIIPRAFVLQFLQSKGLIKDAQLITPFKFSEKTFLQKFVSRFEEEASQLLKLYDEK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00892 370 FunFam Mitochondrial transcription termination factor-like 142 360 - -
Rops11g00892 370 Pfam mTERF 78 229 IPR003690 GO:0003690|GO:0006355
Rops11g00892 370 Pfam mTERF 180 349 IPR003690 GO:0003690|GO:0006355
Rops11g00892 370 Gene3D Transcription termination factor 3, mitochondrial 177 366 IPR038538 -
Rops11g00892 370 PANTHER CGI-12 PROTEIN-RELATED 39 357 IPR003690 GO:0003690|GO:0006355
Rops11g00892 370 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Rops11g00892 370 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Rops11g00892 370 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Rops11g00892 370 SMART mt_12 164 192 IPR003690 GO:0003690|GO:0006355
Rops11g00892 370 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00892 Rops-Chr11 12850990 12852682 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops11g00892 mTERF 1.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00892 K15032 - gmx:102663105 404.06