Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00891 ATGTTTTCTTACTATCGCAGAGCCTCGCTCTGCCCCAATCTCAACCCCAGCCCCATCTTCTTCTCTATTCTTCTGAAACCCTTTTCATCTTCCATAGAAAAACACTCTTTTACCTTCAATTACCTTGTCAACAATTGTGGGTTATCCCCTGAAACCGCTTCCAAACTCTCCAAACGAGTTCATCTCAAAAACTCGGACAGACCCGACTCAGTCCTCGCCTTGTTCAGAAGCCATGGCTTCTCAAACGCTCAGTTATCTGGAATCATCCGAACCCGCCCTGAACTTCTTTGTTTCGATACCAACAAGACCATTCTTCCCAAATTCAATTTCTTTCTCTCAAAGGGTGCTTCGAGTTCAGACCTTGTGCAGATTGTGACCAAGAATAGCCATGTCTTGCTTCCAAGCTTGGAGAATACCATCACCCCATGTTATGATTTTGCCAAAAGATTCTTGCTTTCTGATAAATCCACCATTCAATCTGTAAAATCCTGCCCTTTCTTGCTTTATTATAATAACACAGCACATAATATTCAAGTGCTGCTTGATAATGGGGTCCCTGTATCAAACGTTGCTTTTTTGTTTCGTCTTCGGTGTTACTTTGTCACTAAGCATCGTGCTATCTTTGAGAAGGCAGTGAGAGAAGTAAAGGAATTGGGATTCAAACCCAACACAACATCTTTCATTGTAGCAGTGCGGGCAAAGGTTATGAGTAAATCCCTGTGGGAAAGGAAGATTGATTTGTATAAGAAATGGGGTTGGTCTGAGGAAATTGTTGCTTCAGCTTTTGTGAGGTGTCCATGGTGCATGCTGGTATCTGAGGATAAAATTGAGGCAGTGATGGAGTTTTGGGTCAACCACATGGGTTGGGAGTCTCTGATGCTTGCCAAATACCCAATACTTCTTATGATGAGTTTGGAGAAAAGAGTTACTCCAAGGGCTTTTGTCTTGCAATTTCTTCAATCCAGAGGTTTGATTAAGAATGCTCAATTGATCAGTCGGTTTACAGTTTCTGAAAAGATGTTCTTGCAGAAATTCGTGAATTGCTTTGAGGAGGAAGCTTCTCAGCTGTTGAAGCTGTATGAAGAGAAAAGATATCTTCCAAGATAA 1107 0.4173 MFSYYRRASLCPNLNPSPIFFSILLKPFSSSIEKHSFTFNYLVNNCGLSPETASKLSKRVHLKNSDRPDSVLALFRSHGFSNAQLSGIIRTRPELLCFDTNKTILPKFNFFLSKGASSSDLVQIVTKNSHVLLPSLENTITPCYDFAKRFLLSDKSTIQSVKSCPFLLYYNNTAHNIQVLLDNGVPVSNVAFLFRLRCYFVTKHRAIFEKAVREVKELGFKPNTTSFIVAVRAKVMSKSLWERKIDLYKKWGWSEEIVASAFVRCPWCMLVSEDKIEAVMEFWVNHMGWESLMLAKYPILLMMSLEKRVTPRAFVLQFLQSRGLIKNAQLISRFTVSEKMFLQKFVNCFEEEASQLLKLYEEKRYLPR* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00891 368 PANTHER CGI-12 PROTEIN-RELATED 34 351 IPR003690 GO:0003690|GO:0006355
Rops11g00891 368 FunFam Mitochondrial transcription termination factor-like 136 353 - -
Rops11g00891 368 Gene3D Transcription termination factor 3, mitochondrial 130 359 IPR038538 -
Rops11g00891 368 SMART mt_12 291 325 IPR003690 GO:0003690|GO:0006355
Rops11g00891 368 SMART mt_12 122 153 IPR003690 GO:0003690|GO:0006355
Rops11g00891 368 SMART mt_12 86 117 IPR003690 GO:0003690|GO:0006355
Rops11g00891 368 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Rops11g00891 368 SMART mt_12 158 186 IPR003690 GO:0003690|GO:0006355
Rops11g00891 368 Pfam mTERF 237 341 IPR003690 GO:0003690|GO:0006355
Rops11g00891 368 Pfam mTERF 72 224 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00891 Rops-Chr11 12839734 12841385 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops11g00891 mTERF 1.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00891 K15032 - gmx:102663105 423.705