Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00890 ATGTTTTGTTACTGTCGCAGAGCCCTGCTCTGCCCCAACATTAACCCCAATCTCAACCCCATCATCCCCTCTCTTCTTCTTCTTCTTCTTAAACCCTATTCATCTTCCAAAGAAAAACACTCTTTTACCTTCAATTACCTTGTCAACAATTGCGGGTTACCCCCAGAAACCGCTTCCAAACTCTCCAACCGAGTTCGCCTCGACAACTCAGACAGACCCGACACGGTCCTCGCCTTGTTCAGAAGCCACGGCTTCTCAAACGCTCAGTTATCTAGAATCATCCGAACCCGCCCAAAGCTTCTTTCTTCCAATCCCAACAAGACCATTCTTCCCAAGTTCAATTTCTTTCTCTCAAAGGGTGCTTCAAGTTCCGACCTTGTGGACATCGTCACCAAGAATCCCCGTTTCTTGGAACTAAGCTTGGAGAAAACCATCACCCCATGTTATGATTTCGTAAAAAGATTCTTGCTTTCTGATAAATCCACCATTCACTCTGTAAAATCCTGCGCTTGCGTGCTTTATTCTAATGACACAGCACATAATATTCAAGTGCTGCTTCAGAATGGGGTCCCTGAATCAAACGTTGCTTTTTTGCTTCGTCATTGGTGTTACTCAGTGGCCGCTGAGCATCGTGCTATCTTTGAGAAAGCAGTGGAAGAAGTAAAAGCATTGGGATTCAAACCCAACACAACATCTTTCCTTGTAGCAGTGCGTGCTAAGACCAGAGCTTTTGTAAGGTATCCATGGTGCATGCTGGCATCTGAGGATAAAATTGAGGCAGTGATGGAGTTTTGGGTCAACCACATGGGTTGGGAGTCTCTGATGCTTGCCAAATACCCAACACTTCTTGCGCTGAGTTTGAAGAAAAGAATTATTCCCAGGGCTTTTGTCTTGCAATTTCTTCAATCCAGAGGTTTGATTAAGGATGCTAAACGGTCCACACCATTTATAGTTTCTGAGAAGATGTTCTTGCAGAAATTTGTGAGTCGCTTTGAGGAGGAAGCTTCTCAGCTGTTGAAGCTGTATAAAGAAAAAAGAGATCTTCCAAGATAA 1053 0.4406 MFCYCRRALLCPNINPNLNPIIPSLLLLLLKPYSSSKEKHSFTFNYLVNNCGLPPETASKLSNRVRLDNSDRPDTVLALFRSHGFSNAQLSRIIRTRPKLLSSNPNKTILPKFNFFLSKGASSSDLVDIVTKNPRFLELSLEKTITPCYDFVKRFLLSDKSTIHSVKSCACVLYSNDTAHNIQVLLQNGVPESNVAFLLRHWCYSVAAEHRAIFEKAVEEVKALGFKPNTTSFLVAVRAKTRAFVRYPWCMLASEDKIEAVMEFWVNHMGWESLMLAKYPTLLALSLKKRIIPRAFVLQFLQSRGLIKDAKRSTPFIVSEKMFLQKFVSRFEEEASQLLKLYKEKRDLPR* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00890 350 Pfam mTERF 245 323 IPR003690 GO:0003690|GO:0006355
Rops11g00890 350 Pfam mTERF 77 229 IPR003690 GO:0003690|GO:0006355
Rops11g00890 350 PANTHER CGI-12 PROTEIN-RELATED 38 332 IPR003690 GO:0003690|GO:0006355
Rops11g00890 350 FunFam Uncharacterized protein 39 177 - -
Rops11g00890 350 Gene3D Transcription termination factor 3, mitochondrial 55 341 IPR038538 -
Rops11g00890 350 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Rops11g00890 350 SMART mt_12 273 307 IPR003690 GO:0003690|GO:0006355
Rops11g00890 350 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Rops11g00890 350 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00890 Rops-Chr11 12827572 12828891 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops11g00890 mTERF 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00890 K15032 - gmx:102663105 370.933