Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00889 ATGTTTTGTTACTGTCGCAGAGCCCTGCTCTGCCCCAACATTAACCCCAATCTCAACCCCATCATCCCCTCTCTTCTTCTTCTTCTTCTTAAACCCTTTTCATCTTCCAAAGAAAAACACTCTTTTACCTTCAATTACCTTGTCAACAATTGTGGGTTACCCCCAGAAACCGCTTCCAAACTCTCCAACCGAGTTCGCCTCGACAACTCAGACAGACCCGACTCCGTCCTCGCCTTGTTCAGAAGCCACGGCTTCTCAAACGCTCAGTTATCTAGAATCATCCGAACCTACCCAAAGCTTCTTTCTTTCGATCCCAACAAGACCCTTCTTCCCAAGTTCAATTTCTTTCTCTCAAAGGGTGCTTCAAGTTCCGACCTTGTGCACATCGTCACCAAGAATCCCCATTTCTTGTGTCGAAGCTTGGAGAAAACCATCACCCCATGTTATGATTTCATCAAAAGATTCTCGCTTTCTGATGAATCCACTATTCAGTCTATAAAAAACCGTGTTTGCCGGCTTTATTCTAATAACACGGCACATAATATTCAAATCCTGCTTGAGAATGGGGTCCCTGAATCAAACGTTGCTCTTGTGCTGCTTCGTCATCGGTGTTTCTTTGTCGGTGAGCCTTGTGCTAACTTTAAGAAGGCAGTGGAAGAAGTAAAGGAATTGGGATTCCAACCCAACAAAACATATTTTATTGTAGCAGTGCATGCTAAGGTTATGAGAAAATCCCTGTGGGAAAGGAAGATTGATTTGTATAAGAAATGGGGCTGGTCTGAAGAAATTATTGTTTCAACATTTGTGAGGTATCCATGGTGCATGCTGGCATCTCAGGATAAAATTGAGGCAGTGATGGAGTTTTGGGTCAACCACATGGGTTGGGACTCTCTGGTGCTTGCCAGATACCCAACACTTCTTACGCTGAGTTTGAAGAAAAGAATTATTCCCAGGGCTTTTGTCTTGCAATTTCTTCAATCCAGAGGTTTGATTAAGGATGCTAAATGGACCACAACGTTTATAGTTTCTGAGAAGAGGTTCTTGAAGAAATATGTGAATTGCTATAAGGAGGAAGCTTCTCAGCTGTTGAAGCTGTATGAAGAGAGAAGAGATCTTCCAAGATAA 1125 0.4284 MFCYCRRALLCPNINPNLNPIIPSLLLLLLKPFSSSKEKHSFTFNYLVNNCGLPPETASKLSNRVRLDNSDRPDSVLALFRSHGFSNAQLSRIIRTYPKLLSFDPNKTLLPKFNFFLSKGASSSDLVHIVTKNPHFLCRSLEKTITPCYDFIKRFSLSDESTIQSIKNRVCRLYSNNTAHNIQILLENGVPESNVALVLLRHRCFFVGEPCANFKKAVEEVKELGFQPNKTYFIVAVHAKVMRKSLWERKIDLYKKWGWSEEIIVSTFVRYPWCMLASQDKIEAVMEFWVNHMGWDSLVLARYPTLLTLSLKKRIIPRAFVLQFLQSRGLIKDAKWTTTFIVSEKRFLKKYVNCYKEEASQLLKLYEERRDLPR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00889 374 Gene3D Transcription termination factor 3, mitochondrial 167 365 IPR038538 -
Rops11g00889 374 Pfam mTERF 77 229 IPR003690 GO:0003690|GO:0006355
Rops11g00889 374 Pfam mTERF 174 348 IPR003690 GO:0003690|GO:0006355
Rops11g00889 374 PANTHER CGI-12 PROTEIN-RELATED 38 358 IPR003690 GO:0003690|GO:0006355
Rops11g00889 374 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Rops11g00889 374 SMART mt_12 196 227 IPR003690 GO:0003690|GO:0006355
Rops11g00889 374 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Rops11g00889 374 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Rops11g00889 374 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Rops11g00889 374 FunFam Mitochondrial transcription termination factor-like 141 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00889 Rops-Chr11 12814862 12816755 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops11g00889 mTERF 7.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00889 K15032 - gmx:102663105 420.239