Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00884 ATGGGTTCCAATGTTTCTCCTCCGATGAATGAAGAGGAAGGGAGGTATAGAGGAATCGCCACCGATAACCCTTACTATGGCACCTTTCAAGGCGTTGCCAATTACTATCCTTCTCCCAACCTACCACCCGCTTCCTACGGTGGACCCCACGCTTATTACCAAGGTCAAGGACAAGGATACCATGTTATTCCAGTTTATGCCGTTGCTGAAGGAAGGCCCGTAAGAGAACATCGTCTTCCTTGCTGTGGACTTGGTCTCGGTTGGTTCTTGTTTATCATCGGTTTCTTTTTCGGTGGTCTTCCCTGGTACATTGGAGCTTTCATTCTAGCATGTGTACGGATGGATTACCGAGAAAAGCCTGGATTAATTGCATGCACAGTTGCTTCCCTGGTTGCTGTGATAGCTGTCACACTTGGTGTCACACATCCAGATATGGTGAAGTTGACATGA 450 0.4756 MGSNVSPPMNEEEGRYRGIATDNPYYGTFQGVANYYPSPNLPPASYGGPHAYYQGQGQGYHVIPVYAVAEGRPVREHRLPCCGLGLGWFLFIIGFFFGGLPWYIGAFILACVRMDYREKPGLIACTVASLVAVIAVTLGVTHPDMVKLT* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00884 149 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 20 142 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00884 Rops-Chr11 12739948 12744059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00884 9 141 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 37.949 6.96e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00884 - - gmx:102662831 168.703