Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00882 ATGACCACTTCAATTCTGTCATCCTCTATCTCCTTCACCCAGTTAACACCATACCTCATATGTTTCATCCTTCTACTACTCCTCCTTGAACAGATCTCATACCTCACAAAGAAACGTTTCATCCCAGGCCCATCACTTGTGTTGCCTTTCATAGGCAACGCTATCTCATTGGTTCGTGACCCGACCAAGTTCTGGGACCTTCAATCCTCTTTAGCAAAGTCCACTACCCTAGGATTCTCCACAAACTACATCATAGGCAACTTCATAGTCTTCATCAGAGACACCGAGCTTTGTCACAAGATCTTCGCCAATGTCAGGCCCGATGCCTTTCATCTCGTGGGCCACCCTTTTGGGAAGAAGCTCTTTGGTGAGCATAATCTCATCTACATGATGGGCCAACAACACAAAGATCTCCGCCGTAGGATCGCACCTAACTTTACTCCCAAGGCCCTCTCTACCTACACCGCGTTGCAGCAGATTATTATCCTCAACCACTTAAAGTCATGGGTTGAGAAAGCCCAACACGAGTCTATTCCTCTTCGGGTTCCGGCCCGTGACATGAACCTCGAGACTTCACAAACAGTTTTCGTGGGCCCATACTTGGGCCCGAAAGCCCGAGAGAGATTAGAACGTGATTACTTCCTCTTCAACGTCGGCCTCATGAAGCTTCCCATTGATTTCCCTGGCACGGCGTTCCGAAACGCGAGGCTCGCCGTCGACCGTCTAGCCGGAACCTTAGCCACATGCACGGCAATGAGCAAGGGGAGAATGGAGAAAGGTGAAGAACCTTCGTGTCTCATAGATTACTGGATGCAAGACACTCTCAGGGAGATCGAGGAAAAAAGGCTCGCCGGAGAATCGCCGCCGTCGTTCTCCAGCAACGCTGAAATCGGTGGTTACCTCTTTGATTTCCTCTTCGCGGCGCAGGACGCTTCAACGTCGTCGCTTCTTTGGGCGGTGGCGCTGCTCGACGCGCACCCGGAGGTTCTGGCAAAGGTGAGGGAAGAAGTCGCCGGAATCTGGTCGCCGGAGTCTGACGCGCTGATAACATCGGAGCAGCTTAGGGAGATGAAGTACACTCATGCGGTGGCGCGTGAGGTAATAAGGTACCGTCCGCCGGCGACTCTGGTCCCTCACATCGCGGCGGAGAGGTTTCCGTTGACGGAGTCGTATACGATTCCGAAGGGAGCGATTGTGTTCCCGTCGGCGTTTGAGTCATCGTTTCAAGGGTTCACTGAACCGGACCGGTTCGACCCGGACCGGTTCAATGAGGAGAGACAAGAGGACCAAATATTTAAAAGAAACTTTCTGGCTTTTGGGGCTGGGCCCCACCAATGTGTGGGCCAGAGGTACGCTTTGAATCACCTTGTTCTGTTCATCGCTATGTTCACTTCGTTGATTGATTTCAAGAGGGACAGAACGGACGGCTGTGATGACATCGCTTATGTGCCTACGATTTGCCCCAAAGACGATTGCAGGGTTTTCTTGTCTAAGCGTTGCACAAGGTATCCTTCTTTCCCTGGGGTTGAAGAGCTAGTCAAATGA 1545 0.5172 MTTSILSSSISFTQLTPYLICFILLLLLLEQISYLTKKRFIPGPSLVLPFIGNAISLVRDPTKFWDLQSSLAKSTTLGFSTNYIIGNFIVFIRDTELCHKIFANVRPDAFHLVGHPFGKKLFGEHNLIYMMGQQHKDLRRRIAPNFTPKALSTYTALQQIIILNHLKSWVEKAQHESIPLRVPARDMNLETSQTVFVGPYLGPKARERLERDYFLFNVGLMKLPIDFPGTAFRNARLAVDRLAGTLATCTAMSKGRMEKGEEPSCLIDYWMQDTLREIEEKRLAGESPPSFSSNAEIGGYLFDFLFAAQDASTSSLLWAVALLDAHPEVLAKVREEVAGIWSPESDALITSEQLREMKYTHAVAREVIRYRPPATLVPHIAAERFPLTESYTIPKGAIVFPSAFESSFQGFTEPDRFDPDRFNEERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFTSLIDFKRDRTDGCDDIAYVPTICPKDDCRVFLSKRCTRYPSFPGVEELVK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00882 514 PANTHER CYTOCHROME P450 26 40 464 - -
Rops11g00882 514 Pfam Cytochrome P450 42 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 FunFam Cytochrome P450 61 31 499 - -
Rops11g00882 514 SUPERFAMILY Cytochrome P450 37 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 Gene3D Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS E-class P450 group IV signature 298 324 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS E-class P450 group IV signature 430 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS E-class P450 group IV signature 405 423 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS E-class P450 group IV signature 357 373 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS E-class P450 group IV signature 446 464 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS E-class P450 group IV signature 41 58 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 CDD CYP61_CYP710 78 492 - -
Rops11g00882 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Rops11g00882 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g00882 514 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00882 5 506 Cytochrome P450 AT2G34500 68.911 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00882 K09832 - gmx:100808148 871.692