Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00873 ATGGGAAAGCTAATAACCACTACCAAACCTCTCATCCTGCAATCAAAGCTCCTCTGTTTTTCTCTTCTCTATCTCTTCACCACTCTCTTCCTTGCTCTTTACACCACTCTCTCCCAATCCAAATGCCTCTTCAGATCATCCCCTTTGGATCCCATTCAGAATTCTCTTTTCTCTTACCCTTCTTCCTATGGAGAACACAAGTATGCTGTCTCAACCACCCGCTCTACCTGTTCTTCCCCTGTCTTCTTTTCCGATTACTGGGATGTTGTGAAGGAGATCAAGAATTCCCACAATAACTCTCCAGGGGTTCTAAGGTATATGCAGGGGAATGCTGATAGTTTTGGTGGGAATTTCAGCACCCTTACGAGGTTTTCTTATTTTGATCATCAAAATGATAGCATAGAAGTTCCATGTGGATTTCTGAAGAAGTTTCCAATCAGTGATTCTGATCGAATTGCCATGGAAAAGTGTGACAATGTAGTTGTAGTTTCAGCAATCTTCAATGACCATGACAAAATCAGACAACCGAAGGGTCTTGGATCAAAAACACCGGAGGATGTGTGTTTCTTCATGTTCATAGATGATGTTACCCTCAAGGGTCTTAAACGTCATGGATTGATTTCAATAAACTCCAGTGAATACAAGATAGGTGTATGGAGGCTTGTGAAGGTTGAAAAAGAGGGTTTATATCAGAGCCCAGCAATGAATGGGATTATACCAAAATATTTGGTCCATAGGCTATTCCCAAATTCCCAATTCAGCATTTGGTTAGATGCAAAGTTGCAACTAATGGTTGATCCCTTGTTGTTAATTCATTCACTTGTTATATCTGAGAATGTAGACATGGCCATATCAAAACACCCTTATTATGTTCATACCATGGAAGAAGCAATGGCAACTGCAAGGTGGAAGAAATGGTGGAATGTCAATGCCTTGAAGATGCAAATGGAGACATACTGTGAAAATGGACTGCAACCATGGAGTCCCAGCAAACAACCCTATGCGTCCGATGTACCAGACAGTGCTCTGATATTGAGGAGGCATGGATTGGGCAGTAACCTTTTCTCTTGCCTTATGTTCAATGAGTTGGAGGCATTTAACCCAAGAGACCAATTGCCCTTTGCATTTGTTAGAGATCACATGAAGCCTAACCTGAAGCTGAACATGTTTGAGGTGGAAGTTTTTGAACAGGTGGCAGTGGAGTACAGGCACAATATTAAGAGCAGTGATGGGACCATTGTCAAGAAAGTGTCCAGTTTAGTAAGAACCAAAAGGGCAGCCCCAGATTTGTCTTATGTGAATGGAAGCTGTTGTGGCAGGTGCCAGAAGTATCTTTCTATAATGTGGGGTGAATCCAATCATTGA 1365 0.4183 MGKLITTTKPLILQSKLLCFSLLYLFTTLFLALYTTLSQSKCLFRSSPLDPIQNSLFSYPSSYGEHKYAVSTTRSTCSSPVFFSDYWDVVKEIKNSHNNSPGVLRYMQGNADSFGGNFSTLTRFSYFDHQNDSIEVPCGFLKKFPISDSDRIAMEKCDNVVVVSAIFNDHDKIRQPKGLGSKTPEDVCFFMFIDDVTLKGLKRHGLISINSSEYKIGVWRLVKVEKEGLYQSPAMNGIIPKYLVHRLFPNSQFSIWLDAKLQLMVDPLLLIHSLVISENVDMAISKHPYYVHTMEEAMATARWKKWWNVNALKMQMETYCENGLQPWSPSKQPYASDVPDSALILRRHGLGSNLFSCLMFNELEAFNPRDQLPFAFVRDHMKPNLKLNMFEVEVFEQVAVEYRHNIKSSDGTIVKKVSSLVRTKRAAPDLSYVNGSCCGRCQKYLSIMWGESNH* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00873 454 Pfam Protein of unknown function (DUF616) 110 404 IPR006852 -
Rops11g00873 454 PANTHER ALKALINE CERAMIDASE-RELATED 10 409 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00873 Rops-Chr11 12499618 12502513 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00873 - - gmx:100809755 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00873 11 12499618 12502513 Rops11g00873 11 12499618 12502513 ECH
Rops11g00873 11 12499618 12502513 Rops2g01131 2 16066181 16075992 PCT