Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00849 ATGGTTCAAACCATGATAGACAGTGGTAGTGGGCGTGATTCTGAAATGAGCTTGGAGACTGTGAATTCCACGCAGAGAACTTCAATGAGTAGTGGTAGCGAAAGCATTTGCAGCACCAGCTTCAGCCGTCTCTCTTTCGATCTTCTCCCTACGTCGTCGCCGGAGAGTCTCTCCATCAAGCCTCACCGGTCTTCTGACTTCGCATACTCCGCCATCCGCTCCGCCACTTTCGGCCGCAAGTCCGGCCTCACCTTCCGTGACTTCCACCTCCTCCGCCGCATCGGCTCCGGCGACATCGGCACCGTGTACCTCTGCCGCCTCCGAGAAGGCACCGCTCACGAGTTCGACGACGATCCTGCCTGTTTCTACGCCATGAAGGTGGTTGACAAAGAGGCCGTGGCACTGAAGAAGAAGTCGCAGAGAGCAGAAATGGAGAGAAAGATTCTCAAGATGCTTGACCATCCTTTCCTCCCTACGCTCTATGCTGAGTTTGAAGCCTCTCATTTCTCTTGCATTGTTATGGAGTTTTGCTCCGGTGGTGACTTGCACTCCCTCCGTCATAACCACCCTCACAACCGTTTCTCTCTCTCCTCTGCAAGGTTTTACGCGGCTGAAGTACTGGTGGCGTTGGAGTACCTTCACATGCTGGGAATCATCTACAGGGATCTAAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTCTCTGATTTTGATCTTTCTATGTGTTCAGACGCAATCCCAGCCGTTGAATCACCAGATTTTTCACCATCCCCACCTGCGGTTCCCTTCACCCGCACGCAGTCTACCCCGTTCTCGTGTCTCTCGAAACGAATCTTCCGGTCCAGAAAGGTGCAGACCGTTCAATCGAACCGGCTATTCGTGGCCGAACCGGTTGGGGCCAGGTCGTGTTCTTTCGTTGGGACCCATGAGTATGTGTCGCCGGAGGTGGCTTCCGGAAACTCTCACGGCAACGCCGTGGACTGGTGGTCCTTCGGGATATTCATCTACGAGCTGGTGTATGGTCGTACACCGTTCGCGGGTCCATCAAACGAGGCTACGCTGCGAAACATCATAAAAAAGCCTCTGACATTCCCTACCTCCACGCCCTCTAGCACGCTTGAAATGCACGCGCGGGACCTCATCTCTGGATTATTGAACAAGGATCCGAACCGCAGGCTCGGGTCGAAGCGAGGTGCTGCTGACGTCAAGAAGCATCCGTTCTTCGCAGGGCTTAACCTGGCGCTGATACGGATGGTGACACCTCCGGAGGTGCCGAGCCTCAGAAGGCACAAAACGACACCGTCGTTTCCCGTTAAAGACAACGGCAACAGAATTAACAGTAGACAGCAGCCTACGACGTCGTTTGATTTCTTTTGA 1389 0.54 MVQTMIDSGSGRDSEMSLETVNSTQRTSMSSGSESICSTSFSRLSFDLLPTSSPESLSIKPHRSSDFAYSAIRSATFGRKSGLTFRDFHLLRRIGSGDIGTVYLCRLREGTAHEFDDDPACFYAMKVVDKEAVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHNHPHNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSMCSDAIPAVESPDFSPSPPAVPFTRTQSTPFSCLSKRIFRSRKVQTVQSNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYELVYGRTPFAGPSNEATLRNIIKKPLTFPTSTPSSTLEMHARDLISGLLNKDPNRRLGSKRGAADVKKHPFFAGLNLALIRMVTPPEVPSLRRHKTTPSFPVKDNGNRINSRQQPTTSFDFF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00849 462 Gene3D Phosphorylase Kinase; domain 1 86 176 - -
Rops11g00849 462 Coils Coil 125 145 - -
Rops11g00849 462 CDD STKc_phototropin_like 86 433 - -
Rops11g00849 462 FunFam serine/threonine-protein kinase D6PK-like 304 430 - -
Rops11g00849 462 FunFam protein kinase PINOID 2 86 176 - -
Rops11g00849 462 SUPERFAMILY Protein kinase-like (PK-like) 70 436 IPR011009 -
Rops11g00849 462 FunFam protein kinase PINOID 177 245 - -
Rops11g00849 462 Gene3D Transferase(Phosphotransferase) domain 1 305 430 - -
Rops11g00849 462 Pfam Protein kinase domain 306 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00849 462 Pfam Protein kinase domain 88 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00849 462 MobiDBLite consensus disorder prediction 440 462 - -
Rops11g00849 462 PANTHER FLIPPASE KINASE 1-RELATED 22 432 - -
Rops11g00849 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Rops11g00849 462 MobiDBLite consensus disorder prediction 429 462 - -
Rops11g00849 462 SMART serkin_6 88 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00849 462 MobiDBLite consensus disorder prediction 1 34 - -
Rops11g00849 462 ProSiteProfiles Protein kinase domain profile. 88 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00849 462 Gene3D Transferase(Phosphotransferase) domain 1 177 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00849 Rops-Chr11 12016627 12018688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00849 13 462 AGC Kinase Gene Family AT2G34650 66.667 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops11g00849 Pkinase 3.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00849 - - gmx:100795536 735.717