Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00827 ATGGAAAATGTTCTAGATTTTACCGGCATTGTTTTCTACCTCCTGATTCATGACTCGAGCAAGATGGGCAGTATTATGCATTTCTGGCAATGTTACTTGGATTTGGTTGTTATAGCAGAGATGTGGTATCAGTTTGTAGAAATTATTCTAGAGGTACACACAAGCATGCAGTATCCAAAAGAACCACCTTGTGTTGATCTTGTGGAGAGCAAGGATCTGGAGGAACAGAGACAAAAGCATTTATTAAATTACACACAAAGTAAAGCCTATGAGCTCTCCCCTTGTTTGACGCTTGTAATTCTCTGTGAGTTAATGTGGTTGAATATGGATTTGGAGCACAAGAACGTGACTGGACAGGGATTTGTGAAGTGGGTCACAATGCATGAGTTTCAGTGTCATGCTGGTGCCAAGACCAAACACCTTAACAATCACATATACTTTGACAATGGAAAAACCATCTATGCTGTTGTTCAAGAACTGAAAAACACTCTTGAGGAGATGTTTTTTGATGCAATCCAAAATGTGACTGACTCTTACATCAATAAAGAGAATTTTAGTATCTGGAAAGCATCATATCAAGCTGCTACTCGGGAGCTTCAGCGTATCTATGGAAAGGATGAAGTGATTCTTGAGCTCAATTTTTTGCTTACTTCTAGAAGTTCAGAATGA 669 0.3886 MENVLDFTGIVFYLLIHDSSKMGSIMHFWQCYLDLVVIAEMWYQFVEIILEVHTSMQYPKEPPCVDLVESKDLEEQRQKHLLNYTQSKAYELSPCLTLVILCELMWLNMDLEHKNVTGQGFVKWVTMHEFQCHAGAKTKHLNNHIYFDNGKTIYAVVQELKNTLEEMFFDAIQNVTDSYINKENFSIWKASYQAATRELQRIYGKDEVILELNFLLTSRSSE* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00827 222 Pfam Tify domain binding domain 125 160 IPR032308 -
Rops11g00827 222 PANTHER RING FINGER PROTEIN 25 44 104 IPR039133 GO:0061630
Rops11g00827 222 Gene3D Ubiquitin Conjugating Enzyme 21 117 IPR016135 -
Rops11g00827 222 SUPERFAMILY UBC-like 36 103 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00827 Rops-Chr11 11764382 11775248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00827 117 193 PHD Transcription Factor Family AT3G53680 42.857 4.34e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00827 - - gmx:100782217 142.895