Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00822 ATGTTCTCCACCACTCCCCCCTCCCCAACTCCACCTCCACCTCCTTCACCATCCACCCTCACTTTCTCCGCCGGTGTCGCCGTCCTCTCTTCATCTCCCCCAACTGCTTCACCATCACCGCACCACCACCAGTGCAAATCTCAGCCACATTACACAGTCCAACCAAGCAAGGTGATTAAGAAGGATTCGGCTAAGAAGACAGCGAAGAAATCAAGGGTTAAGGCATTCGTGAAGCTGGTGAACTACCAGCACCTGATGCCCACTCGCTACACCCTCGATGTGGATCTTAAGGATGTTGTGTCCCTGGATGCCCTCCACTCCAAGGACAAGAAGGTGACTGCACTCAAAGAGACCAAGAAGCGTTTTGAGGAGAGGTTCAAGACTGGCAAGAATAGGTGGTTCTTCACCAAACTTCGATTCTTCGTCCATGGTTGGTTTCTGCTTCAGGGGAAGAAGATAGTGACAGAGATATGGGGAGGGACGGGAGGGTGA 492 0.5244 MFSTTPPSPTPPPPPSPSTLTFSAGVAVLSSSPPTASPSPHHHQCKSQPHYTVQPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSLDALHSKDKKVTALKETKKRFEERFKTGKNRWFFTKLRFFVHGWFLLQGKKIVTEIWGGTGG* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00822 163 Gene3D - 43 140 IPR038655 -
Rops11g00822 163 SUPERFAMILY Translation proteins SH3-like domain 58 140 IPR008991 -
Rops11g00822 163 Coils Coil 105 125 - -
Rops11g00822 163 PANTHER 60S RIBOSOMAL PROTEIN L27 55 140 IPR001141 GO:0003735|GO:0005840|GO:0006412
Rops11g00822 163 MobiDBLite consensus disorder prediction 20 54 - -
Rops11g00822 163 MobiDBLite consensus disorder prediction 1 66 - -
Rops11g00822 163 MobiDBLite consensus disorder prediction 1 19 - -
Rops11g00822 163 Pfam Ribosomal L27e protein family 57 140 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00822 Rops-Chr11 11727565 11728200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00822 55 140 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 87.209 7.65e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00822 K02901 - zju:107416856 140.969