Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00814 ATGGCAAGGTTTAGTTCCAGTTCAAGTTATAGTAACTCTGATTTCATTTATCGTGGGGTTCTACTTCCCATCCTTTCATTATCACACATTTTCTTTCAACTTGCAACGTGTGGCTCCATACTAGAGTTCCTTCCTGGATTCCAGGGACCACTTCCCTTTGTGCTTGAAACTGGGTATGTGGGAGTGGGTGAAAGAGAGGATGTACAGGCCTTCTACTACTTCATTGAGTCAGAGAACAATCCAAAAGAAGATCCTCTCATGCTTTGGCTAACCGGTGGTCCCGGTTGCTCTGCATTTTCTGGCCTTGTCTTTGAAATTGGTCCACTTGCATTTAAAAATGAGGAATACAATGGGAGCCTGCCTAATTTGGTCTTGAGGCCACACTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATCTGCCTGTTGCCACGGGCTTTACTTATGCCAGAACAGAGTCTGCTGCTCAACGAAGTGATTGGAAACTAGTTCATCAAGCCCATCAATTTCTTAGGAAGTGGTTGATTGATCATCCAAATTTTTTGTCAAATGAAGTTTATATTGGTGGCGATTCATACTCTGGCATTCCTGTTCCGGTAATTGTTCAAGAAATTTCACAAGGAAATGAAAAAGGGGTCCAACCATGGATAAATCTGCAGGGATACCTGCTGGGGAATGCTGTAACAACTAGAAGGGAAGAAAACTATGCAATCCCCTTCGCTCATGGAATGGGACTCATTTCTGATGAACTATATGAGTCACTGCAAAAAAATTGCAATGGGGAGTATTTAGATGTAGACACCAGCAATGTATTGTGTTCAAGAGATATCAACTCATTCAATGAGGCTACATCAGGACTTAGACTAGGCCATATTTTGGACCCTAAATGTGAGTGGCTTGATACTGCTGTTTCTTGGAGGAGATCTCTAATTAAGAAAGATCCCTCGAAGTTCCTCAATACTCATCTCAAATTGCCACCCTTAAGCTGTTGGAGTTATGCATACTTCCTTTGCGGTTTTTGGGCCAATGATGATAATGTTCGCAAAGCACTGCACGTACGTAAGGGAAGTATTGAGAAATGGCATCGCTGTACCTTCGATATACCTCACAAAGAGGATATCCCTAGCAGCTTTGATTATCATTTAAATCTAAGTAGGAAAGGTTATCGTTCGCTAATATACAGTGGCGATCATGACATGAAGATTCCATTCTTAGCAACTCAAGCATGGGTAAGATCTTTAAATTACTCTATTGTGGAGGATTGGAGGCCATGGCATACAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCCAACCAGATGACATTTGCAACTGTGAAGGGTGGAGGGCACACAGCTCCTGAGCACAAGCCTGAAGAATGCTTGGACATGTACAGTAGGTGGCTATCTAATAGGGCTTTGTAG 1428 0.4237 MARFSSSSSYSNSDFIYRGVLLPILSLSHIFFQLATCGSILEFLPGFQGPLPFVLETGYVGVGEREDVQAFYYFIESENNPKEDPLMLWLTGGPGCSAFSGLVFEIGPLAFKNEEYNGSLPNLVLRPHSWTKVSSIIFVDLPVATGFTYARTESAAQRSDWKLVHQAHQFLRKWLIDHPNFLSNEVYIGGDSYSGIPVPVIVQEISQGNEKGVQPWINLQGYLLGNAVTTRREENYAIPFAHGMGLISDELYESLQKNCNGEYLDVDTSNVLCSRDINSFNEATSGLRLGHILDPKCEWLDTAVSWRRSLIKKDPSKFLNTHLKLPPLSCWSYAYFLCGFWANDDNVRKALHVRKGSIEKWHRCTFDIPHKEDIPSSFDYHLNLSRKGYRSLIYSGDHDMKIPFLATQAWVRSLNYSIVEDWRPWHTNGQVAGYTRTYSNQMTFATVKGGGHTAPEHKPEECLDMYSRWLSNRAL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00814 475 Gene3D alpha/beta hydrolase 50 475 IPR029058 -
Rops11g00814 475 SUPERFAMILY alpha/beta-Hydrolases 43 473 IPR029058 -
Rops11g00814 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Rops11g00814 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Rops11g00814 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Rops11g00814 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Rops11g00814 475 FunFam Serine carboxypeptidase-like 11 35 475 - -
Rops11g00814 475 Pfam Serine carboxypeptidase 45 472 IPR001563 GO:0004185|GO:0006508
Rops11g00814 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 42 459 IPR001563 GO:0004185|GO:0006508
Rops11g00814 475 FunFam Carboxypeptidase 378 472 - -
Rops11g00814 475 FunFam Carboxypeptidase 329 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00814 Rops-Chr11 11610533 11615797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00814 35 64 Calmodulin-binding Proteins AT2G22960 66.667 8.63e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00814 K16296 - gmx:100792006 824.313