Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00801 ATGGTTGTGGAAGATACCCCAAACTCAAGCATCACCGATGACCAAATCAACAACCCTAATAGGGTTCACGACGATGACGACCTCGAAGAAGGAGAGATCCCCGACGGCGATGACTCCTCCGCCACTTCCAAGCCTCCGACCACCGTCGTCAGCCACCCTCACCCCCTCGAGAATTCTTGGACCTTCTGGTTCGACAACCCTTCTGCTAAGTCAAGACAAGCCGCTTGGGGAAGTTCGATCCGACCCATCTACACTTTCGCCACCGTCGAAGAGTTTTGGAGTGTTTACAATAACATACACCGTCCAAGCAAGTTGGGGGACAAAGCAGATTTCCATTGTTTCAAGCATAAGATTGAACCAAAGTGGGAGGACCCCATTTGTGCTAATGGGGGGAAATGGACTATGGCCTTTTCTAGGGGAAAATCTGATACCAGTTGGTTATATACGTTGTTGGCAATGATTGGGGAACAATTTGATCACGGAGACGAAATTTGCGGAGCAGTTGTGAATATCAGAAATAGGCAGGAAAAGATTTCTATTTGGACTAAGAATGCTTCTAACGAAGCTGCTCAGGTAAGCATTGGGAAACAGTGGAAGGAGTTTCTTGATTATAATGACCCCATTGGCTTTATATTTCATGAGGATGCAAAGAAGCTTGAGAGAGCTGCTAAAAACAAATACGTCGTATGA 690 0.4638 MVVEDTPNSSITDDQINNPNRVHDDDDLEEGEIPDGDDSSATSKPPTTVVSHPHPLENSWTFWFDNPSAKSRQAAWGSSIRPIYTFATVEEFWSVYNNIHRPSKLGDKADFHCFKHKIEPKWEDPICANGGKWTMAFSRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNIRNRQEKISIWTKNASNEAAQVSIGKQWKEFLDYNDPIGFIFHEDAKKLERAAKNKYVV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00801 229 MobiDBLite consensus disorder prediction 1 53 - -
Rops11g00801 229 Gene3D RNA Cap, Translation Initiation Factor Eif4e 46 229 IPR023398 -
Rops11g00801 229 ProSitePatterns Eukaryotic initiation factor 4E signature. 110 133 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Rops11g00801 229 MobiDBLite consensus disorder prediction 1 17 - -
Rops11g00801 229 SUPERFAMILY eIF4e-like 31 224 IPR023398 -
Rops11g00801 229 Pfam Eukaryotic initiation factor 4E 55 205 IPR001040 GO:0003723|GO:0003743|GO:0006413
Rops11g00801 229 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 37 217 IPR001040 GO:0003723|GO:0003743|GO:0006413
Rops11g00801 229 FunFam Eukaryotic translation initiation factor 4E 46 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00801 Rops-Chr11 11488162 11490012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00801 1 229 Eukaryotic Initiation Factors Gene Family AT4G18040 66.805 4.51e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00801 K03259 - gmx:100793288 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00801 11 11488162 11490012 Rops11g00801 11 11488162 11490012 ECH