Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00793 ATGGAATCGAAAAACCCCGCAAGGTTTAAGCTGGGGAAACAATCATCGCTTGCCCCAGAACGCCATAGAGAAGAAGAAGAGCTCCATGAAGATGGTGATGCTATTGATCCGGGAGTGAGGCTTATGTATTTGGCCAACGAAGGAGATGTGGATGGTATCCGTGAGGTGTTGGAATCTGGTGTGAGTGTGAATTTCAGGGATATTGATGGCCGCACTGCTCTTCATGTTGCTGCGTGTCAAGGGTTGACTCCTGTTGTTGTTCTGTTACTCGAGAAAGGTGTTGAGGTTGATCCTAAAGATCGATGGGGGAGCACGCCACTTGCAGATGCTATATTTTATAAAAACAATGATGTGATCAAACTATTGGAGAAGCATGGAGCAAAACCTGTGATGGCTCCGATGCATGTTAATCATGCACGTGAAGTCCCAGAATATGAAATCCATCCTAAAGAACTTGATTTTACCAACAGTGTAGAGATAACAAAGGGGACTTTCTGTAGTGCACTATGGCGTGGGACAGAGGTTGCGGTCAAAAAGCTCGGGGAGGATGTGCTTAGTGATGAGGAGAAAGTGAAGGCTTTCAGAGATGAGCTTGCTCTGTTCCAGAAGATCCGGCATCCAAATGTAGTCCAATTTCTGGGTGCTGTGACCCAGAGTAGTCCAATGATGATTGTGATAGAATATCTTCCAAAGGGAGATCTTCGTGATTACTTGAAAAGAAAAGGAGCTTTGAAACCATCAACAGCTGTGAGATTTGCACTTGATATTGCTAGGGGAGTGGGTTATTTGCATGAAAATAAGCCATCACCCATTATTCATCGTGATCTTGAGCCTTCTAATATATTGCGGGATGATTCCGGGCACCTAAAAGTTGCAGACTTTGGGGTTAGCAAATTGCTGTCAGTTAAAGAAGACAGGCCTCTAACTTGCCAAGATACTTCTTGCCGCTATGTGGCTCCTGAGGTTTTCAAACAAGAAGAATATGACACCAAAGTGGATGTGTTCTCATTTGCACTAATTCTGCAAGAGATGATTGAAGGCTGCCCTCCTTTTGATGCAAAGCGTGAAGATGAGGTTCCTAAGGTATATGCTGCAAAAGAGCGACCGCCTTTCCGAGCTCCAGCCAAGCGTTATTCACATGGACTTCGAGAATTGATTGAAGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACATTTAGGCAAATAATAACAAGGCTGGAGTCCATCTACAACACAATCGGTCAAAAGAGACATTGGAAGGTTAGGCCATTGAAATGCTTCCAAAATCTTGAAGCCTTATTGAAGAGGAACCATTCAAATCTAAGCAGTAGGGGCAGTTCATCTGGATCCACAGCTAGTCGTATATGA 1371 0.4427 MESKNPARFKLGKQSSLAPERHREEEELHEDGDAIDPGVRLMYLANEGDVDGIREVLESGVSVNFRDIDGRTALHVAACQGLTPVVVLLLEKGVEVDPKDRWGSTPLADAIFYKNNDVIKLLEKHGAKPVMAPMHVNHAREVPEYEIHPKELDFTNSVEITKGTFCSALWRGTEVAVKKLGEDVLSDEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVIEYLPKGDLRDYLKRKGALKPSTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLSVKEDRPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFDAKREDEVPKVYAAKERPPFRAPAKRYSHGLRELIEECWNENPAKRPTFRQIITRLESIYNTIGQKRHWKVRPLKCFQNLEALLKRNHSNLSSRGSSSGSTASRI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00793 456 PIRSF ILK 1 430 - -
Rops11g00793 456 ProSiteProfiles Protein kinase domain profile. 119 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00793 456 Gene3D Phosphorylase Kinase; domain 1 146 229 - -
Rops11g00793 456 FunFam Os01g0748600 protein 140 427 - -
Rops11g00793 456 SMART ANK_2a 102 131 IPR002110 GO:0005515
Rops11g00793 456 SMART ANK_2a 69 98 IPR002110 GO:0005515
Rops11g00793 456 CDD STKc_MAP3K-like 160 407 - -
Rops11g00793 456 SUPERFAMILY Ankyrin repeat 41 130 IPR036770 -
Rops11g00793 456 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Rops11g00793 456 Gene3D Transferase(Phosphotransferase) domain 1 230 449 - -
Rops11g00793 456 Gene3D - 4 145 IPR036770 -
Rops11g00793 456 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Rops11g00793 456 MobiDBLite consensus disorder prediction 15 30 - -
Rops11g00793 456 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
Rops11g00793 456 PRINTS Tyrosine kinase catalytic domain signature 226 239 IPR001245 GO:0004672|GO:0006468
Rops11g00793 456 PRINTS Tyrosine kinase catalytic domain signature 265 283 IPR001245 GO:0004672|GO:0006468
Rops11g00793 456 PRINTS Tyrosine kinase catalytic domain signature 378 400 IPR001245 GO:0004672|GO:0006468
Rops11g00793 456 FunFam Integrin-linked protein kinase family 19 145 - -
Rops11g00793 456 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 160 416 - -
Rops11g00793 456 SUPERFAMILY Protein kinase-like (PK-like) 153 408 IPR011009 -
Rops11g00793 456 MobiDBLite consensus disorder prediction 1 30 - -
Rops11g00793 456 Pfam Protein tyrosine and serine/threonine kinase 170 407 IPR001245 GO:0004672|GO:0006468
Rops11g00793 456 FunFam serine/threonine-protein kinase STY46-like 147 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00793 Rops-Chr11 11326528 11334071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00793 8 428 MAP Kinase Kinase Kinase AT4G18950 69.789 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Rops11g00793 PK_Tyr_Ser-Thr 2.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00793 - - gmx:100790126 809.29