Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00787 ATGGAGGTTGGCAACTTCTTTGCCTTCTTATTTATTGCATTCAATTGCTTCCAGTTGCTGAGAATTTCTGAATCAAAATTAGCCCAAGAAGAAGTTGATGCTCTTAAAGAAATTGTCAGTACCATGGGTGCCACCTATTGGAAGTTTGATGCTGATTCCTGCGAAATTGAAATGGTTGGACTAACGCTAGAACCACCAGCTGAATCAGAGAGAAGCATTGGTTGTGACTGCACCTTCGAAAACCATACTGTCTGTCATGTTGTAAAGATGACCCTCAAGCGCCTTAGTCTGCCTGGCATACTCCCACCTCAACTGGCCAAGCTACCTTTCCTCCAAGAAATAGATTTTGCTTACAATTGCTTCAATGGTACAATTCCAAAGGAATGGGCTTCAATGAAATTAACTTCAATCTCTCTTCTTGTGAATCGCTTGTCAGGAGAAATTCCTAAGCATCTAGGAAATATTACTACTCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGTGTTGTTCCGCCTGAACTTGGGAGTCTGATTAACTTGCAGACCTTGGTGCTATCATCCAATCATTTGACTGGGAACTTACCACTGACACTTGCTGGATTACAAAATTTGACCGATTTTAGGATAAATAATAACAATTTTACTGGAACCATACCTAATTTCATACAGAACTGGCAACTTCTCCAGAGACTAGAAATGCATGCAAGTGGACTAGAGGGACCTATTCCATCGAATATATCTCTCTTGAAGAACTTAAATCAGTTAAGAATCAGTGATATAAGAAGTCCTGGTCAGAATTTTCCTTTTCTGGGGAACATGGCAGCCCTGACTACATTTCCAACTGTCCAAGTTCCTAAGCATAGGGTTCACCTGGTACTTGGATGGATGAAGGTGAAAGTTGAGAGCTCCAAGTGCAGCAGCAGACATGGGGAATACTTATTCATAGCAGAATCCTTGTCTTTTGATTGTGGGATCAGGAGAGTAACTTCCCTCATAACTTCTGGAGGAATGTTTGTTTGGGAATCTCTCTCCTGGAATGGTTTGAGGACCGTGGAGTCCTCCCTTGATTGGGGCTCAGGTAATATGCTAAGTGGAAACATACCAAATTCAATCCTGAAGGATGGAAGTAGCATTGATCTTTCTTACAACAACTTTACTTGGCAAGGCCCTGAGCAACCTGCTTGTCAGGACGGCATGAACTTAAATCTGAATTTGTTCAGAAGCTCGTCGAAAGAAAATAAGTTAGAGGAATATGTTCCTTGCTCAAAGAATTTCAGCTGTCCACGGTATTCAAGTTGTTTACATGTTAATTGTGGAGGGAAGGATGTAAATGTGAAGGATGATAAAGGTGAAAATCTTTATGTGGGAGATGGGCATGTTCAGGGTGGCACTGCAACCTATTTCTATAGTGACACTAATCACTGGGGATTTTGTAGCACTGGAGACTTCATGGATGATTTTGAGTCCCAAAACATACGTTACACTGTATCTCTTCCATCTTCAAATATGCCTGAGTTATATACAACAGCACGTGTATCTCCAATTTCACTTACCTATTTCCATCATTGCATGGAAAATGGGAACTATACTGTAAATCTCCACTTTGCTGAAATACAGTTTACAAATGATAATACATATAGAAGACTTGGGGAGCGCATATTTAATATCTATGTTCAGGAAAAACTGATTTGGAAGAATTTTAATATAGAGAATGAGACAAATGGTGCTGAAAAACCACTGGTACTGCCTATATACAATGTCAGCGTCACAAATAATATCTTGGAGATTCGTTTCTACTGGGCCGGCAAAGGAACATCTAGAATTCCTGATGTTGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTGGTTTCTGATTCTAAACAATGCTCAAATGGAGAGAAGGCAGTTGCTGTTTCTAAAATCATTGCAATTATAGCTGGGGCTCTATGCCTAGTGTTTTTTATATCTGGATTCACTTGGTGGAAAGGCTTTTGCCGTGGGAAATTGCAAAGGAAGGAAGGTACAAAAAGTGGAGATAGTCAGACAGGTAATTTTAGCTTGGAGCAGATCAGAGCTGCCACTAATGACTTCTCTTCTGCTAATAAGATTGGGGAAGGTGGTTTTGGTCCTGTATTCAAGGGTCAATTGCCTGATGGTACTTTAATAGCAGTCAAGCAACTATCATCAAAATCACGGCAGGGAAATCGAGAATTTATAAATGAAATAGGCTTGATATCTTGTTTGCAACACCCAAACCTTGTAAAGCTTCGTGGATCTTGCACTGAAGGGGAGCAACTTTTGTTGGCATATGAGTACATGGAAAATAACAGCCTTTCCAAAGCTTTATTTGGTAGTGAAAACAATCAACTTAAAATGAATTGGCCTACAAGGCATAGGATTTGCATTGGCATAGCAAAAGGTCTAGCATTTCTCCATGAAGAGTCAACACTCAGGATAGTTCACAGAGACATCAAGGCTTCTAATGTGTTACTTGATGGCAAATTAAATCCGAAAATATCTGACTTCGGCTTGGCTAAGCTTGATGAAGAGGAGAAGACCCATATCAGCACCCGGGTTGCTGGGACTATAGGATATATGGCACCAGAATATGCATTATGGGGCTATCTTACACACAAGGCTGATGTTTACAGTTTTGGAGTTGTTGTCTTAGAAATTGTTAGTGGGAAAAGCAATAACAATTATCTACCAGACGATGGAAGTGTTTGTCTTTTGGATTGGGCATGTAAGTTGCAACAAACTCAAAACTTGGTGAGGCTGATTGACGAAAAGTTGGGGCCAGAGGTTAATATAATGGAAGCAGAAAAGGTGGTCAAAGTAGCTCTCCTGTGCACAAATGCTTCTCCATCACTTAGGCCTATAATGTCTGAGGTGGTGAATATGCTTGAAGGACAAGCAGTTATTCCTGATTTGAACCCTGAACCAAGTGCCTACAATGAGGATTTAAGGTTTAAAGCCTTACGAGACTTCCATCAACATCAGTCAAAGATTAGTTCAAGTGGAAGCCAGAGCCAACATTCAATGACAGTACATACATCCAGTTCAACCTCTGGTGGTAATACTTGCACAAGCTAA 3102 0.4049 MEVGNFFAFLFIAFNCFQLLRISESKLAQEEVDALKEIVSTMGATYWKFDADSCEIEMVGLTLEPPAESERSIGCDCTFENHTVCHVVKMTLKRLSLPGILPPQLAKLPFLQEIDFAYNCFNGTIPKEWASMKLTSISLLVNRLSGEIPKHLGNITTLTYLMLEANQFSGVVPPELGSLINLQTLVLSSNHLTGNLPLTLAGLQNLTDFRINNNNFTGTIPNFIQNWQLLQRLEMHASGLEGPIPSNISLLKNLNQLRISDIRSPGQNFPFLGNMAALTTFPTVQVPKHRVHLVLGWMKVKVESSKCSSRHGEYLFIAESLSFDCGIRRVTSLITSGGMFVWESLSWNGLRTVESSLDWGSGNMLSGNIPNSILKDGSSIDLSYNNFTWQGPEQPACQDGMNLNLNLFRSSSKENKLEEYVPCSKNFSCPRYSSCLHVNCGGKDVNVKDDKGENLYVGDGHVQGGTATYFYSDTNHWGFCSTGDFMDDFESQNIRYTVSLPSSNMPELYTTARVSPISLTYFHHCMENGNYTVNLHFAEIQFTNDNTYRRLGERIFNIYVQEKLIWKNFNIENETNGAEKPLVLPIYNVSVTNNILEIRFYWAGKGTSRIPDVGVYGPLVSALSVVSDSKQCSNGEKAVAVSKIIAIIAGALCLVFFISGFTWWKGFCRGKLQRKEGTKSGDSQTGNFSLEQIRAATNDFSSANKIGEGGFGPVFKGQLPDGTLIAVKQLSSKSRQGNREFINEIGLISCLQHPNLVKLRGSCTEGEQLLLAYEYMENNSLSKALFGSENNQLKMNWPTRHRICIGIAKGLAFLHEESTLRIVHRDIKASNVLLDGKLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTHKADVYSFGVVVLEIVSGKSNNNYLPDDGSVCLLDWACKLQQTQNLVRLIDEKLGPEVNIMEAEKVVKVALLCTNASPSLRPIMSEVVNMLEGQAVIPDLNPEPSAYNEDLRFKALRDFHQHQSKISSSGSQSQHSMTVHTSSSTSGGNTCTS* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00787 1033 Gene3D Ribonuclease Inhibitor 196 287 IPR032675 -
Rops11g00787 1033 Gene3D Ribonuclease Inhibitor 44 195 IPR032675 -
Rops11g00787 1033 FunFam Putative LRR receptor-like serine/threonine-protein kinase 776 982 - -
Rops11g00787 1033 MobiDBLite consensus disorder prediction 1004 1033 - -
Rops11g00787 1033 SUPERFAMILY L domain-like 83 280 - -
Rops11g00787 1033 Gene3D Transferase(Phosphotransferase) domain 1 776 980 - -
Rops11g00787 1033 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
Rops11g00787 1033 Pfam Protein tyrosine and serine/threonine kinase 703 971 IPR001245 GO:0004672|GO:0006468
Rops11g00787 1033 SMART serkin_6 700 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00787 1033 Gene3D Phosphorylase Kinase; domain 1 668 775 - -
Rops11g00787 1033 Pfam Malectin domain 435 623 IPR021720 -
Rops11g00787 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 1009 - -
Rops11g00787 1033 ProSiteProfiles Protein kinase domain profile. 700 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00787 1033 CDD STKc_IRAK 706 973 - -
Rops11g00787 1033 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 669 775 - -
Rops11g00787 1033 SUPERFAMILY Protein kinase-like (PK-like) 683 998 IPR011009 -
Rops11g00787 1033 Gene3D - 433 630 - -
Rops11g00787 1033 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Rops11g00787 1033 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 433 628 - -
Rops11g00787 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00787 Rops-Chr11 11242594 11254376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00787 5 866 Receptor kinase-like Gene Family AT1G29750 56.829 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g00787 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00787 - - qlo:115990047 1310.82