Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00773 ATGGCTGATCATTCAGGGAACAATGGAAACCACGAGTTGGTTTTAAATGTAAACGATGATGCCTCCAAGAAGTGTGATAACATCGAAGAAGACTGTGTGCCTCTTTTGCAGAAGTTGGTAGCAGAGATAGTGGGCACCTACTTCTTGATATTTGCAGGCTGTGCTGCGGTGGTGGTGAACCTTGACAATGACAAAGTTGTTACACTTCCCGGGATTTCAATTGTTTGGGGACTCGCAGTTATGGTATTGGTTTATTCTCTAGGTCACATCTCTGGTGCTCATTTCAACCCTGCTGTCACCATCGCTCATGCTTCCACCAAAAGGTTTCCCTTGAAGCTGGTACCAGCTTACATACTAGCTCAGGTGGTTGGATCCACACTTGCAAGTGGAACTCTCAGACTTTTATTCAGTGGCAAAGATAACCATTTTGTAGGAACACTACCGGCTGGTTCTGACCTGCAAGCTTTTGTGATCGAATTCATTATCACTTTCTACCTCATGTTCGTCGTTTCTGGTGTAGCCACCGACAACAGAGCGATTGGTGAGTTGGCTGGGCTTGCAGTTGGGTCTACAGTGCTACTAAACGTGATGTTTGCCGGGCCAATAACTGGAGCATCAATGAATCCAGCAAGGAGCTTAGGGCCTGCTATTGTGCACAATGAGTACACAGGAATATGGATATATTTGGTGTCACCTATTCTTGGTGCTGTGGCTGGTACATGGACCTACACTTTCATCAGGTATACCAACAAGCCAGTGCGTGAAATCACTAAGAGTGCCTCCTTCCTCAAAGGTAAAGGACGTGGGGGAGCTGAATGA 819 0.4628 MADHSGNNGNHELVLNVNDDASKKCDNIEEDCVPLLQKLVAEIVGTYFLIFAGCAAVVVNLDNDKVVTLPGISIVWGLAVMVLVYSLGHISGAHFNPAVTIAHASTKRFPLKLVPAYILAQVVGSTLASGTLRLLFSGKDNHFVGTLPAGSDLQAFVIEFIITFYLMFVVSGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVHNEYTGIWIYLVSPILGAVAGTWTYTFIRYTNKPVREITKSASFLKGKGRGGAE* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00773 272 Pfam Major intrinsic protein 33 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g00773 272 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Rops11g00773 272 CDD MIP 37 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g00773 272 Gene3D Glycerol uptake facilitator protein. 2 259 IPR023271 -
Rops11g00773 272 PANTHER AQUAPORIN NIP2-1 24 263 IPR034294 -
Rops11g00773 272 NCBIfam MIP family channel protein 41 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g00773 272 SUPERFAMILY Aquaporin-like 33 257 IPR023271 -
Rops11g00773 272 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g00773 272 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g00773 272 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g00773 272 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g00773 272 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g00773 272 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00773 Rops-Chr11 11074602 11076657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00773 1 264 Major Intrinsic Protein MIP AT5G37810 54.982 8.28e-101 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00773 K09874 - gmx:100786924 466.848