Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00761 ATGATGAGGTGGGGAGGTAGAAAATCTTCTTCAGCTTCTTCTTCTAGGCCTTCTTTCGTCCCCCATGCATCTCCTTTTTCTTGGCTATCCAAGTTCAAGAAGATGAGAATCAATTCAGAGCCAAATCCTGGAAAAATGAAGCAGAAGGCAAAGCAGAATTCTACATCTGTTGCTTCACCACAGTATTCTTGTGGGAATGGAGATAGAATTTTTGGAGGGGATGAAGGTGCTATCTGGAGACGATCATTTGATGAAGAGAGTCAACATGAGGATAAGAGAAGTAAAGATTTTCATGAGAATATCATTCCATCCTCAAGTTGTCATAGTGGTGGAAGGAATGCTAAGAAACATGGAAGAAGAGAAGGCATCCTTAAGTCAAAGGAGAAGGATATTGGTCTGGGAGAAGAAGGAAAATTGCTAAATAATGATAGGAAGGTTTCAAGGGAGATGGATGAGTACGATCGAGAAAAGGAATATGAATCCTTAAGGAGGAGATTTGAGAGGAAAGCACAAGAAGTTCTGCAAGAGCAACTCTTGAAATTAGAAAGAGAAGTAGAGGAAGTTGAATTTGCACCAAGTAAAGCAGTAGAAAAAGATGTTCTGCAATTTGAATCACCGAGAACAATTTGTACGCCAAGAGCACATTCTTTTGCCACTTCTGCAGAATCGAAGAATTCTAGCATTAGAAATATTATTGAAGATCGTGTGTTTACTAACCAGAGCTTTGAGAAAACTGACATGTTGTCACAGAAGAAATTGAGTTATTGGGGGCAGAATCTGGAACAAACTGAGGAGTTGAAGGTTAAGACTAACAAACAGAAGCAACCACTTCATGTCAGCAGAGAACTTCAGAGGAGGAAACCAAAGCATAGTTCCAGGGTCAGAATATATTCTCCAAGGATGGTTGCCAAGGTTGAAATCTGCAGAATAAAGGCTCTAGAAGACATGAGGAAAGCAAAACTGAAGATGAAGAAAGAAAGGGAGGAAATTGTGGAGGGAACACCGGGATTAGATAGCTTTGCTGTGATTAAATGTTCATTAGATCCAAAGCAGGATTTCAGAGATTCAATGATTGAGATGATCATTGAGAAACAGATTCGCCAGCCAGAAGAAATGGAAGAGCTGTTGGCATGTTATCTGACTTTAAATGCTGATGAGTATCATGATCTCATCATCAAAGTATTCCGGCAGGTATGGTTTGACATGAGCCAAGATGGTTTGGGTATTAAATCAGACATGCAATGTTGTTGTTATGAATGA 1260 0.3968 MMRWGGRKSSSASSSRPSFVPHASPFSWLSKFKKMRINSEPNPGKMKQKAKQNSTSVASPQYSCGNGDRIFGGDEGAIWRRSFDEESQHEDKRSKDFHENIIPSSSCHSGGRNAKKHGRREGILKSKEKDIGLGEEGKLLNNDRKVSREMDEYDREKEYESLRRRFERKAQEVLQEQLLKLEREVEEVEFAPSKAVEKDVLQFESPRTICTPRAHSFATSAESKNSSIRNIIEDRVFTNQSFEKTDMLSQKKLSYWGQNLEQTEELKVKTNKQKQPLHVSRELQRRKPKHSSRVRIYSPRMVAKVEICRIKALEDMRKAKLKMKKEREEIVEGTPGLDSFAVIKCSLDPKQDFRDSMIEMIIEKQIRQPEEMEELLACYLTLNADEYHDLIIKVFRQVWFDMSQDGLGIKSDMQCCCYE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00761 419 Coils Coil 156 191 - -
Rops11g00761 419 MobiDBLite consensus disorder prediction 7 21 - -
Rops11g00761 419 MobiDBLite consensus disorder prediction 81 128 - -
Rops11g00761 419 ProSiteProfiles OVATE domain profile. 342 401 IPR006458 -
Rops11g00761 419 MobiDBLite consensus disorder prediction 269 290 - -
Rops11g00761 419 MobiDBLite consensus disorder prediction 45 63 - -
Rops11g00761 419 Coils Coil 309 329 - -
Rops11g00761 419 MobiDBLite consensus disorder prediction 81 99 - -
Rops11g00761 419 NCBIfam uncharacterized plant-specific domain TIGR01568 341 402 IPR006458 -
Rops11g00761 419 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 169 403 IPR038933 GO:0045892
Rops11g00761 419 MobiDBLite consensus disorder prediction 1 67 - -
Rops11g00761 419 Pfam Transcriptional repressor, ovate 346 402 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00761 Rops-Chr11 10926689 10927948 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops11g00761 Ovate 9.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00761 - - gmx:102666239 485.337