Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00756 ATGAGTGAAGAAATCATTGCTGATTCCCCTCCATCTACCATCTCTTCTAACATGGATATTAAAAGGCGAGGCATAAAGAAAAGAATAGTGGAAATCCCAATCAAGGACATGGAGGGGACTGGGCTAAAAGGAGAGAATAGTAACACTCCACCTTCTGATTCATGGGCATGGAGAAAATATGGCCAGAAACCCATCAAAGGCTCCCCTTATCCAAGAGGATACTATAAGTGTAGCAGTTCAAAGAGCTGCCCAGCGAGAAAACAAGTGGAAAGGAATCGCGTGGACCCCACCATGCTTCTCGTGACTTATTCCTCTGACCACAACCACCCATCGCCGCCGCCTAGAAACCATAACAACCGCAACGGCAACTCCGCTGCCAAATCAAACAAAGAATCCGAACCTGACGAGAGGTTATCGGATCCTGGCGATGATTCGCTGATCGCCGGCGTGGATCAGTTAGGTTGGTTGGGCGGTGAAGTGGAGGCGATCGCGTCGGCGGCGGTTCTCGAGAGTCCGATTTTCTCTGAGCAGGAAGCGTCGATGTTGGGGGAAGAGGAGGAGTCTCTTTTCGCTGATCTCGGTGAGTTGCCGGAGTGCTCGGTGGTGTTCCGGCGAGGGGTGATGCTTGAGAGGGAGGAAGAGCAGCGCCGGCGGTTTGCGTGTGGGACCACTAGTTGA 678 0.5221 MSEEIIADSPPSTISSNMDIKRRGIKKRIVEIPIKDMEGTGLKGENSNTPPSDSWAWRKYGQKPIKGSPYPRGYYKCSSSKSCPARKQVERNRVDPTMLLVTYSSDHNHPSPPPRNHNNRNGNSAAKSNKESEPDERLSDPGDDSLIAGVDQLGWLGGEVEAIASAAVLESPIFSEQEASMLGEEEESLFADLGELPECSVVFRRGVMLEREEEQRRRFACGTTS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00756 225 MobiDBLite consensus disorder prediction 36 145 - -
Rops11g00756 225 ProSiteProfiles WRKY domain profile. 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g00756 225 SUPERFAMILY WRKY DNA-binding domain 49 112 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g00756 225 SMART WRKY_cls 51 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g00756 225 Gene3D WRKY domain 38 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g00756 225 Pfam WRKY DNA -binding domain 53 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g00756 225 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 200 IPR044810 GO:0003700
Rops11g00756 225 MobiDBLite consensus disorder prediction 98 128 - -
Rops11g00756 225 MobiDBLite consensus disorder prediction 1 19 - -
Rops11g00756 225 FunFam WRKY transcription factor 65 39 112 - -
Rops11g00756 225 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00756 Rops-Chr11 10819594 10821060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00756 22 205 WRKY Transcription Factor Family AT1G29280 50.000 1.43e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops11g00756 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00756 - - psat:127080568 258.84