Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00744 ATGGCAAACAGAAATAGACAACAAAGAAACAATACAGAAGCCAGTAACAATACCGCAAGTCAGGCGACAGTTACCTCGACTGTTGTTGAAGCAGTTGTAAGTGAATTAAACACCAATCCTGTCACCATACAGGAAACCAGAGGCCCAACTTATGACCCAAGGACTCCTCCTTATGGTCTTCCTTTAGGGTATACACCACCAATGGTGACTCAGGCCTCCACTAACCCAGCTATGGTGTACACTGATCCAGTAATGGACTTAATTCAGGCAGCTCTCAAGGAAGGTCGACTCACTTTTGATAGAGGAAAAACAAATGAAGGTACGATACCCATGGAGATTGGCGATCTTCGTCAACTTGAGTTTGTAGCATTGGGATATAACAACTTGAGTGGACCTATTCCTCCAAAACTCCTCAACATTTCAACATTGACATACTTGCATATTGGAAACAATTATCTTTCAGGCATTCTTCCATCAGACATGGGATATGGCCTTGCTAACCTAGAACAACTACACTTGTTTAAAAACAAACTTGTTGGAAACATTCCAAATAGTATTTCCAACTCATCTAAGCTAATTAAATTTGATTTGCGTAGCAATGAATTCAGTGGAGTTATATCCAATGTATTTGGAGATATAAGAGTCCTCGAATGGCTCAATATAAGTGACAATAATTTGACGCTTGAATTTAACTTCCTTACTTCGCTGACAAGTTGCAAACATTTGACATATTTGTATATATCATGGAATAGTTTGCTATCAAAACTTCCTAAATCAATTGGAAAGTTATCCATGCCTCTAGAAAATTTTTGGGCAAATTTTTGCAAAATTTATGGCAATATTCCACTGGAAATTAGAAACATAAGCAACTTGATAACTTTATCTTTGATTGGGAATGATATAAATGGACAAATGCCTGGTACAATCAAAGGGTTACAAAAACTTCAGTATTTGGATCTTGACTACAATGGACTACAAGGGTTCCTTGTTGATGAGCTTTGTGAATTTAGAAGTTTGAACATCTTAGAAGTAAACTTATCCTCCAATGCTTTAATTGGAAATCTTCCACCTGAGATTTGGCAACTAAGAGCTCTTGCACTATTAGATCTGTCAAGAAATGAGATTTCAAGCAACACTCCTTCAACCATCAGTTTCTTGAAAACTTTGCAGACTCTCTCCTTAGCGCATAACAAATTGGAGAGGTCTATCCCTGCATCACTTGGCCAAATGGTAAGCTTGAGCTTCTTAGACTTATCTCAAAATCTTTTGTCTGGTGTGATTCCAAAATCCTTGGAGTCACTTGTCTATCTTAAAAACATCATCTTTTCATACAATAGATTACAAGGAGAGATTCCCAATGGTGGATCTTTCAAAAATTTCACAGCTCAATCTTTCATGCATAATGAAACACTTTGTGGTAATCCTCGCCTACAAGTGCCTCCATGTGGTAAACAAGTTAGGCAAAGATCAATGGCAAAGAAACTTTTAATCAAATGCATGCTGCCCATAATTGTATCAATCATTTTGGTTGTTACATGTGTAATACTTCTAATGCGTAAAAGGAAAAATGTTGAAAATGCACTCGAAAGGGATTTATCAACTTTGGGAGTTTCAAGAAGGATTTCATATTATGAAATTGTACAAGCAACCAATGGATTCAATGAGAATAATTTACTTGGAAAGGGGAGCTTTGGTTATGTGTATCAAGGGATGCTCTCCAGTGGGATGATGGTTGCAGTTAAAGTAATTGTTTTGGACATGGAAGCACCATCAAGGAACTTTGATGCAGAATGCAATGCAATGCGTAATCTACGACATCGAAATCTTGTGAAGATTATCAGTTGTTGTTCAAATGTTGACTTCAAATCTTTGATAATGAAGTTCATGTCAAATGGAAGCTTGGACAAATGGTTATACTCACATAACTATTGTTTAGATTTCTTGCAAAGGCTGAATATAATGATAGATGTGACATCTACATTAGAATATCTCCATTATGGTTCTTTAATACCAGTGGTTCATTGCGATTTGAAGCCAAGTAATGTGTTATTGGATGAAAACATGGTCGCACATGTTTGTGATTTTGGCATTGCTAAGCTCCTCGACGAAGGACAATCTAAAACTCATACGAAGACCTTGGCCTCTTGGTTATGTTGCACCAGAGTATTGCAAAGGATTCGAACTCATGAGACCACTTGA 2199 0.3711 MANRNRQQRNNTEASNNTASQATVTSTVVEAVVSELNTNPVTIQETRGPTYDPRTPPYGLPLGYTPPMVTQASTNPAMVYTDPVMDLIQAALKEGRLTFDRGKTNEGTIPMEIGDLRQLEFVALGYNNLSGPIPPKLLNISTLTYLHIGNNYLSGILPSDMGYGLANLEQLHLFKNKLVGNIPNSISNSSKLIKFDLRSNEFSGVISNVFGDIRVLEWLNISDNNLTLEFNFLTSLTSCKHLTYLYISWNSLLSKLPKSIGKLSMPLENFWANFCKIYGNIPLEIRNISNLITLSLIGNDINGQMPGTIKGLQKLQYLDLDYNGLQGFLVDELCEFRSLNILEVNLSSNALIGNLPPEIWQLRALALLDLSRNEISSNTPSTISFLKTLQTLSLAHNKLERSIPASLGQMVSLSFLDLSQNLLSGVIPKSLESLVYLKNIIFSYNRLQGEIPNGGSFKNFTAQSFMHNETLCGNPRLQVPPCGKQVRQRSMAKKLLIKCMLPIIVSIILVVTCVILLMRKRKNVENALERDLSTLGVSRRISYYEIVQATNGFNENNLLGKGSFGYVYQGMLSSGMMVAVKVIVLDMEAPSRNFDAECNAMRNLRHRNLVKIISCCSNVDFKSLIMKFMSNGSLDKWLYSHNYCLDFLQRLNIMIDVTSTLEYLHYGSLIPVVHCDLKPSNVLLDENMVAHVCDFGIAKLLDEGQSKTHTKTLASWLCCTRVLQRIRTHETT* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00744 732 PANTHER OS04G0122200 PROTEIN 340 710 - -
Rops11g00744 732 Gene3D Phosphorylase Kinase; domain 1 536 628 - -
Rops11g00744 732 Pfam Protein kinase domain 554 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00744 732 SMART LRR_typ_2 312 336 IPR003591 -
Rops11g00744 732 SMART LRR_typ_2 165 189 IPR003591 -
Rops11g00744 732 SMART LRR_typ_2 410 433 IPR003591 -
Rops11g00744 732 SMART LRR_typ_2 386 409 IPR003591 -
Rops11g00744 732 SMART LRR_typ_2 362 385 IPR003591 -
Rops11g00744 732 FunFam Os07g0541700 protein 629 715 - -
Rops11g00744 732 MobiDBLite consensus disorder prediction 1 23 - -
Rops11g00744 732 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 233 486 - -
Rops11g00744 732 SMART serkin_6 553 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00744 732 Gene3D Transferase(Phosphotransferase) domain 1 629 722 - -
Rops11g00744 732 SUPERFAMILY Protein kinase-like (PK-like) 532 709 IPR011009 -
Rops11g00744 732 ProSitePatterns Protein kinases ATP-binding region signature. 559 581 IPR017441 GO:0005524
Rops11g00744 732 FunFam Serine-threonine protein kinase plant-type 534 628 - -
Rops11g00744 732 SUPERFAMILY L domain-like 106 468 - -
Rops11g00744 732 Pfam Leucine rich repeat 343 399 IPR001611 GO:0005515
Rops11g00744 732 Pfam Leucine Rich Repeat 241 263 IPR001611 GO:0005515
Rops11g00744 732 ProSiteProfiles Protein kinase domain profile. 553 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00744 732 Gene3D Ribonuclease Inhibitor 230 490 IPR032675 -
Rops11g00744 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Rops11g00744 732 Gene3D Ribonuclease Inhibitor 102 229 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00744 Rops-Chr11 10645538 10657847 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00744 106 701 Receptor kinase-like Gene Family AT5G20480 36.066 1.01e-112 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops11g00744 Pkinase 3.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00744 - K13420 mtr:25485995 730.324