Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00743 ATGAAAGTAGGAGGCGGAGGCTGTGGGAATTTCTTGCAGGAGATGATGCTGAAGATGGGCTTGACCTTTCAGGGTCAGATAGATTTGCTTTTTTTTTCTGTGGATGATGCACTCAAGGTTACCAAGGAGGGCTCGGCAGGTAGTAGACGGTGGCTGCTTTTGTCCAAGTTGAAGCATGGATTATCCAAGCATAAGGAGGGTCATGGCAAAAAGTTGTTGCCCTGGAACTTGGGCATAGAGGAGAAGGATAAGGTTGAGGTGGAAAATCAAGCAGAGGAGAAGTCTCATGATGATGACCGTGATAAGGTTATTGATACGAACCCAGAGCTTGCTTTAATGGGGTCATGTCTGCTAGTTGTTTTAATGAGGGATGAGGATGTTTATGTGATGAATGTGGGAGATAGCCGGGCCGTAGTGGCACATTATGAGTGCAAAGAGGTTAACTCTAGTAAGGAATCAGGAATCAATGGAGATATTAGCATGGAGAGCATAGTGGAGGAGTCCTTAGCTCCAGGTGAAAGTGCTGTCAAGTTGGGGAATGAGGGTCCTGCTCAAGAAATGAGGTTGGTGGCATTGCAGCTGTCCACGGACCACAGCACGAGCATTGAAGAGGAAGTCATTAGGATTAAGAATGAACATCCTGATGACAACCATTGCATTGTAAATGATAGAGTGAAAGGCCGTCTTGAGGTTACCAGAGCGTTTGGGGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGTAGTACTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATGTCCTGCTGCCCTTCATTACGTCATCATAGATTATGCCCAATAAACAATGGGAAGTGGTATTGA 855 0.4491 MKVGGGGCGNFLQEMMLKMGLTFQGQIDLLFFSVDDALKVTKEGSAGSRRWLLLSKLKHGLSKHKEGHGKKLLPWNLGIEEKDKVEVENQAEEKSHDDDRDKVIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAVVAHYECKEVNSSKESGINGDISMESIVEESLAPGESAVKLGNEGPAQEMRLVALQLSTDHSTSIEEEVIRIKNEHPDDNHCIVNDRVKGRLEVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYMSCCPSLRHHRLCPINNGKWY* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00743 284 Gene3D - 46 281 IPR036457 -
Rops11g00743 284 Pfam Protein phosphatase 2C 59 140 IPR001932 -
Rops11g00743 284 Pfam Protein phosphatase 2C 192 265 IPR001932 -
Rops11g00743 284 ProSiteProfiles PPM-type phosphatase domain profile. 1 284 IPR001932 -
Rops11g00743 284 PANTHER PROTEIN PHOSPHATASE 2C 81 276 IPR015655 GO:0004722|GO:0006470
Rops11g00743 284 SMART PP2C_4 4 283 IPR001932 -
Rops11g00743 284 CDD PP2Cc 104 243 IPR001932 -
Rops11g00743 284 SUPERFAMILY PP2C-like 105 275 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00743 Rops-Chr11 10622007 10622959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00743 11 276 PP2C-type Phosphatase Gene Family AT2G35350 53.135 1.48e-95 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00743 - - gmx:100788093 370.933