Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00736 ATGGCTTGCTCCGCTATGAGTCGAAGAAACATCACCACCGATGAATTTGCGCTTCTTGCGTTCAAATCCTCCATTACTGTAGACCCCTATCATATGATCAGTAATTGGTCAACCTCCTCCTCTTCTTCTTCTTTGTGCAATTGGGTTGGTGTCACTTGTGATTGGCACCATGGAAGAGTGAAGGCTTTGAATCTGAGTAACATGGGCCTTAGAGGTACCATTTCCCCACAACTGGGGAATCTCTCCTTCCTTGTTGAGCTTGACCTCCATGGCAATGGCTTCCAAGGTCAGTTGCCCCAAGAGTTATTTGGGTTGCACCGACTGAAGTTGCTTGACTTGAGCAACAACGAGTTTATTGGAGGAATCTCAGCGGGGGTAGGGGACTTATCAAGACTTCAACATTTGAATCTTGGCCTTAATAATCTTGCTGGTTTTATCCCACAATCTATATACAACTTGTCAAAGTTAGAGCTCCTAAATTGCTCATACAATTTCATCAATGGGACCATTCCACCTGTGATTGGTCAACTTCGTCAGTTGAAGATTTTGGATATTACAAATAACACGCTGTCGGGAACCATACCACTAACAATTTCCAACCTGTCTTCACTTGAAGAAATCCATTTAAATGATAACTCCTTATCAGGAGGAATTCCGAAAGGGATTGGTGACCTTACACAACTAAGAAGATTGCACCTTGCAAGTAATCAGCTTTCAGGCCATATATCATCCACAATATTCAACAACTCATTGTTGCAATATTTTGTTCTTGGTTTTAATAATCTATCCGGTGATCTTCCATCAAATATTTGCCAAGGACTTCCCAAACTTAAATCACTTTATCTTCCCTACAATGATCTTTCTGGTAAGTTACCGACTGTTTGGCATCAATGCAAAGACTTGGAAGATTTAGAACTATCTTTCAATAATTTCGACAAAGGACGTCTGCCAGCCGACTTCGGAAACTTGACCAAGCTTCAATCTTTATATCTTCAAAGCAACAACTTGGAAGGTGAAATCCCAGTCTCCCTTTTAAATATCTCTTCTTTGAGGGAGGTCAACCTTGGAGACAACAATTTAAATGGAAGTGTCCCACAGGAGATGTGTCATCAGCTTCCTCAACTTCAAATCTTTAGCTTATACACTAATCAAATTGAAGGAAGCATTCCAAGATCAATTGGCAACTGCACATCACTTAAAGCGTTATACTTAGGGTATAACCCTCTGACAGGTGAAATCCCAGTCTCCCTTTTAAATATCTCTTCTTTGAGGGTGGTCAGCCTTGCAGAAAACAATTTAAAAGGAAGCATTCCAAGATCAATTGGCAACTGCACATCACTTCAAACGTTATCCTTAGGGTTCAACTATCTGACAGGTTCAATACCCACAGAGATTGGTGATCTTCGTCAACTTGAGAGTGTGTTATTGGGATTTAACAACTTGAATGGACCTATTCCTTCAAAACTCCTCAACATTTCAACGTTGACATTCTTGCATCTTGGAAACAATTCTCTCTCAGGCATTCTTCCATCAGACATGGGATATGGCCTTCCTAACCTGGAACAACTCCACTTGTATACAAATAAACTTGTTGGAAACATTCCAAATGGTATATCCAATGCTTCTAAACTCATTAAGCTCGACTTAAGTGGCAATGAATTCAACGGAATCATACCCAACGTATTTGGAGATTTAACAGTCCTCGAATGGCTCGGTATAGAGGAAAATAATTTGACACTTGAATTCAACTTCTTTACTTCACTAACAAGTTGCAGACATTTGACACATCTGGATGTATCAAAGAATAAGTTACTATCAAAACTTCCCAAATCAATTGGAAACCTATCCAAGTCTCTAGAATATTTCAAGGCAGATTCTTGCAGAATTTATGGCAATATTCCACTAGAAATAGGAAACATAAGCAACTTGATATCTTTATCTTTGAGTGAGAATGATATAAATGGACCAATGCCTAGTACATTTAAAAGGTTGCAGAAACTACAATATTTGGGTCTTGACTTTAATGGACTGCAGGGATCCATCGTTGATGAGCTGTGTGAAATTAAAAGTTTGAGTGAGTTGTATCTAACCAACAACAAGCTTTCTGGAGAGTTGCCAACATGCTTTGGAAACATGACTTCTCTTAGAAAGGTATACTTAGGATCTAACAGATTGATCTCTGGGATACCTTCATCTTTTTGGAGTCTCAAAGATATTTTAATGCTGAACTTTTCCTCCAATGCTTTAATTGGAAATCTTCCACCTGAGATTGGGCAATTGAGAGCTCTTGTTCTACTAGATTTATCAAGAAATCAGATTTCAAGCAACATTCCTGCAACCATTAGTTTCTTGAAAACATTGCAAACTCTCTCCTTAGCGCATAACAAATTGCAAGGGTCTATTCCTAAATCACTTGGCGAAATGGTAAGCTTGAGCTTCTTGGATTTATCCCAAAATCTTTTGTCTGGTGGGATTCCAAAATCCTTAGAGTCACTTGCCTATCTTAAATACATCAACTTTTCATACAATAGATTACAAGGAGAGATTCCCAATGGAGGACCTTTCAAAAATTTCACAGCTCAATCTTTCATGCATAATGAAGCACTTTGTGGCAATCCTCACCTACAAGTGCCTCCATGTGGTAAACAAGTTAGGCAAAGGTCAGTGACAAAGAAGCTATTAATCAAATGCATACCACCCTTAATTGTGTCAATCATTTTGATTGCTGCATGTGTAGTACTCCTACAGCGTAAAAGGAAAAAGGTTGAGAATCCACTTGAAAGGGATTTATCAACTTTAAGAGTTCCAAGAAGAATATCCTATTATGAAATTGTAAAAGCAACTAATGGATTCAGTGAGAGTAATTTACTTGGAAAGGGGAGCTTTGGTTCTGTGTATCAAGGGATGCTCTCCAACGGGATAATGGTTGCAATTAAAGTAATTGATTTGGACTCGGAAGCATCATCAGGGAGCTTTGATGTAGAATGCAATGCAATGCGCAATCTACGACATCGAAATCTTGTTAAGATTATTAGTAGTTGTTCAAATGTTGATTTCAAATCTTTGGTGATGGATTTCATGTCAAATGAAAGTGTGGACCAATGGTTATACTCAAATAACTATTGTTTAGATTTCTTGCAAAGGTTGAATATAATGATAGACGTGGCATCTGCATTGGAATATCTCCATCACGGTTCTTTAATACCAGTGGTTCATTGCGATCTGAAGCCTAGTAATGTTTTACTGGATGAAAACATGGTTGCACATGTCAGCGATTTTGGCATTGCCAAGCTCTTAGATGAAGGACAATCTAAAACTCATACCGAGACCTTGGCTACTCTTGGCTACGTTGCACCAGAGTATGGATCGAAGGGAATTATTTCTGTCAAAGGAGATGTGTACAGTTATGGGATTATGCTAATGGAAATGTTCACAAGAAAGAAGCCAACAGATGATATGTTTGTGGCAGGAATGAGCTTGAAATATTGGATTAGCGAGTCAATGCCCAATTCAATCATGGAAGTTGTGGATTCTAATTTAGTCCAACAATATGGGGAACAAATTAATGACATATTGGCTCACATATCATCTATTTTGGAACTAGCCTTGAGTTGTTGTGTAGATTTACCCGAGGCACGAATTACCATTACAAATGTCATTATGTCATTAACCAAAATCAAGACCCAGTTTACATCCAATCTCTGA 3705 0.3852 MACSAMSRRNITTDEFALLAFKSSITVDPYHMISNWSTSSSSSSLCNWVGVTCDWHHGRVKALNLSNMGLRGTISPQLGNLSFLVELDLHGNGFQGQLPQELFGLHRLKLLDLSNNEFIGGISAGVGDLSRLQHLNLGLNNLAGFIPQSIYNLSKLELLNCSYNFINGTIPPVIGQLRQLKILDITNNTLSGTIPLTISNLSSLEEIHLNDNSLSGGIPKGIGDLTQLRRLHLASNQLSGHISSTIFNNSLLQYFVLGFNNLSGDLPSNICQGLPKLKSLYLPYNDLSGKLPTVWHQCKDLEDLELSFNNFDKGRLPADFGNLTKLQSLYLQSNNLEGEIPVSLLNISSLREVNLGDNNLNGSVPQEMCHQLPQLQIFSLYTNQIEGSIPRSIGNCTSLKALYLGYNPLTGEIPVSLLNISSLRVVSLAENNLKGSIPRSIGNCTSLQTLSLGFNYLTGSIPTEIGDLRQLESVLLGFNNLNGPIPSKLLNISTLTFLHLGNNSLSGILPSDMGYGLPNLEQLHLYTNKLVGNIPNGISNASKLIKLDLSGNEFNGIIPNVFGDLTVLEWLGIEENNLTLEFNFFTSLTSCRHLTHLDVSKNKLLSKLPKSIGNLSKSLEYFKADSCRIYGNIPLEIGNISNLISLSLSENDINGPMPSTFKRLQKLQYLGLDFNGLQGSIVDELCEIKSLSELYLTNNKLSGELPTCFGNMTSLRKVYLGSNRLISGIPSSFWSLKDILMLNFSSNALIGNLPPEIGQLRALVLLDLSRNQISSNIPATISFLKTLQTLSLAHNKLQGSIPKSLGEMVSLSFLDLSQNLLSGGIPKSLESLAYLKYINFSYNRLQGEIPNGGPFKNFTAQSFMHNEALCGNPHLQVPPCGKQVRQRSVTKKLLIKCIPPLIVSIILIAACVVLLQRKRKKVENPLERDLSTLRVPRRISYYEIVKATNGFSESNLLGKGSFGSVYQGMLSNGIMVAIKVIDLDSEASSGSFDVECNAMRNLRHRNLVKIISSCSNVDFKSLVMDFMSNESVDQWLYSNNYCLDFLQRLNIMIDVASALEYLHHGSLIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLLDEGQSKTHTETLATLGYVAPEYGSKGIISVKGDVYSYGIMLMEMFTRKKPTDDMFVAGMSLKYWISESMPNSIMEVVDSNLVQQYGEQINDILAHISSILELALSCCVDLPEARITITNVIMSLTKIKTQFTSNL* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00736 1234 Gene3D Phosphorylase Kinase; domain 1 933 1026 - -
Rops11g00736 1234 PANTHER OS04G0122200 PROTEIN 457 1230 - -
Rops11g00736 1234 Gene3D Ribonuclease Inhibitor 460 513 IPR032675 -
Rops11g00736 1234 Pfam Leucine Rich repeat 590 604 IPR001611 GO:0005515
Rops11g00736 1234 Gene3D Ribonuclease Inhibitor 583 888 IPR032675 -
Rops11g00736 1234 Gene3D Transferase(Phosphotransferase) domain 1 1027 1233 - -
Rops11g00736 1234 Pfam Leucine rich repeat 762 821 IPR001611 GO:0005515
Rops11g00736 1234 Pfam Leucine rich repeat 349 409 IPR001611 GO:0005515
Rops11g00736 1234 Pfam Leucine rich repeat 178 238 IPR001611 GO:0005515
Rops11g00736 1234 Pfam Leucine rich repeat 690 749 IPR001611 GO:0005515
Rops11g00736 1234 Pfam Protein kinase domain 952 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00736 1234 SMART LRR_sd22_2 760 779 - -
Rops11g00736 1234 SMART LRR_sd22_2 105 124 - -
Rops11g00736 1234 SMART LRR_sd22_2 129 155 - -
Rops11g00736 1234 SMART LRR_sd22_2 784 805 - -
Rops11g00736 1234 SMART LRR_sd22_2 323 349 - -
Rops11g00736 1234 SMART LRR_sd22_2 274 306 - -
Rops11g00736 1234 SMART LRR_sd22_2 591 617 - -
Rops11g00736 1234 SMART LRR_sd22_2 712 731 - -
Rops11g00736 1234 SMART LRR_sd22_2 808 834 - -
Rops11g00736 1234 SMART LRR_sd22_2 177 203 - -
Rops11g00736 1234 ProSiteProfiles Protein kinase domain profile. 951 1231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00736 1234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1070 1082 IPR008271 GO:0004672|GO:0006468
Rops11g00736 1234 Gene3D Ribonuclease Inhibitor 11 169 IPR032675 -
Rops11g00736 1234 Gene3D Ribonuclease Inhibitor 272 369 IPR032675 -
Rops11g00736 1234 Gene3D Ribonuclease Inhibitor 370 459 IPR032675 -
Rops11g00736 1234 Gene3D Ribonuclease Inhibitor 170 271 IPR032675 -
Rops11g00736 1234 SMART LRR_typ_2 712 736 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 591 615 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 372 396 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 492 516 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 517 541 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 688 711 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 808 832 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 201 224 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 420 444 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 760 784 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 323 347 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 81 105 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 225 249 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 129 153 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 274 297 IPR003591 -
Rops11g00736 1234 SMART LRR_typ_2 542 564 IPR003591 -
Rops11g00736 1234 FunFam Leucine-rich repeat receptor-like protein kinase TDR 349 583 - -
Rops11g00736 1234 Pfam Leucine rich repeat N-terminal domain 13 54 IPR013210 -
Rops11g00736 1234 SUPERFAMILY L domain-like 276 584 - -
Rops11g00736 1234 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 11 173 - -
Rops11g00736 1234 SUPERFAMILY L domain-like 32 379 - -
Rops11g00736 1234 FunFam Serine-threonine protein kinase plant-type 931 1026 - -
Rops11g00736 1234 SMART serkin_6 951 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00736 1234 ProSitePatterns Protein kinases ATP-binding region signature. 957 979 IPR017441 GO:0005524
Rops11g00736 1234 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1027 1234 - -
Rops11g00736 1234 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 587 884 - -
Rops11g00736 1234 Gene3D Ribonuclease Inhibitor 514 582 IPR032675 -
Rops11g00736 1234 SUPERFAMILY Protein kinase-like (PK-like) 927 1228 IPR011009 -
Rops11g00736 1234 SUPERFAMILY L domain-like 621 874 - -
Rops11g00736 1234 FunFam Leucine-rich repeat receptor protein kinase EMS1 194 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00736 Rops-Chr11 10431189 10441497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00736 611 869 Receptor kinase-like Gene Family AT3G47570 30.268 6.33e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops11g00736 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00736 - K13420 gmx:100784397 1313.52