Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00732 ATGGCTTGCTCCGCTATGAGTCGAAGAAACATCACCACCGATGAATTTGCGCTTCTTGCGTTCAAATCCTCCATTACTGTAGACCCCTATCATATGATCAGTAATTGGTCAACCTCCTCCTCTTCTTCTTCTTTGTGCAATTGGGTTGGTGTCACTTGTGATTGGCACCATGGAAGAGTGAAGGCTTTGAATCTGAGTAACATGGGCCTTAGAGGTACCATTTCCACACAGATTGGGAATCTCTCCTTCCTTGTTGAGCTTGATCTCCATGGCAATGGCTTCTATGGTCAGTTGCCACAAGAGTTATTTGGGTTGCACCGACTGAAGTTGCTTGACTTGAGCAACAACGACCTTGTTGGAGGAATCCCTGCGAGGGTAGGGGACTTATCAAGACTTCAACATTTGAATCTTGGCCTTAATAATCTTGCTGGTTTTATCCCACAATCTATGTTCAACTTGTCAAAGTTGGAGCTCCTAAATTGCTCATTCAATTTCATCAAAGGAACCATTCCACCTGTGATTGGTCAACTTCAGCAGTTGAAGATTTTGGATATTACAAATAACACGCTGTCGGGAACCATACCACCAACAATTTCCAACCTGTCTTCACTTGAAGAAATCCATTTAAATCATAACTCCTTATCAGGAGGAATTCCGAAAGGGATTGGTGATCTTACACAACTAAGAAGATTGCACCTTCGAAATAATCAGCTTTCAGGCCATATATCATCCACAATATTCAACAACTCATTGTTGCAACATTTTGTTCTTGGTTTTAATAATCTATCCGGTGATCTTCCATCAAATATTTGCCAAGGACTTCCCAAACTTAAACTCCTTTATCTTCCCTACAATGATCTTTCTGCCGACATCGGAAACTTGACCAAGCTTCGATATTTATATCTTCGCAGCAACAACTTGGAAGGTGAAATCCCAGTCTCCCTTTTAAATCTCTCTTCTTTGAGGGAGGTCAGCCTTGAAGAAAACAATTTAAATGGAAGTGTCCCACAAGAGATGTGTCATCAGCTTCCTCAACTTCAAGTGTTTAGTTTAACGAGTAATCAAATTGAAGGAAGCATTCCAAGATCAATTGGCAACTGCACATCACTTAAAGAGTTAAACTTAGGGTATAACTATCTGACAGGTTCGATACCCATGGAGATTGGTGATCTTCATGAACTTGAGACAGCAGGCATTCTTCCATCAAGCATGGGATATGGCCTTCCTAACCTGGAAGAACTATTCATGCATGAAAACAAACTTGTTGGAAACATTCCAAATGGTATATCCAATGCTTCTAAACTCATTGAACTCGACTTGAGTGGCAATGAATTCAACGGAATCATACCCAACATATTTGGAGATTTAACAGTCCTCGAATGGCTCGGTATAGAAGAAAATAATTTGACACTTGAATTCAACTTCTTTACTTCACTGACAAGCTGCAGACATTTGACACATCTGGATGTATCAAAGAATAAGTTACTATCAAAACTTCCCAAATCAATTGGAAACTTATCCAAGTCTTTAGAATATTTCAGCGCAGCTTCTTGCAGAATTTATGGCAATATTCCACTAGAAATAGGAAACATAAGCAACTTGATATCTTTATCTTTGAGTGAGAATGATATAAATGGACCAATGCCTAGTACATTTAAAAAGTTGCAGAAACTACAATATTTGGGTCTTGACTTTAATGGACTGCAGGGATCCATCGTTGATGAGCTGTGTGAAATTAAAAGTTTGAGTGAGTTGTATCTAACCAACAACAAGCTTTCTGGAGAGTTGCCAACATGCTTTGGAAACATGACTTCTCTTAGAAAGGTATACTTAGGATCTAACAGATTGATCTCTGGGATACCTTCCTATTTTTGGAGTCTCAAAGATATTTTAATGCTGAACTTATCCTCCAATGCTTTAATTGGAAATCTTCCACCTGAGATTGGGCAATTGAGAGCTCTTATTCTACTAGATTTATCAAGAAATCAGATTTCAAGCAACATTCCTGCAACCATTAGTTTCTTGAAAACATTGCAAACTCTCTCCTTAGCGCATAACAAATTGCAAGGGTCTATTCCTAAATCACTTGGCGAAATGGTAAGCTTGAGCTTCTTGGATTTATCCCAAAATCTTTTGTCTGGTGGGATTCCAAAATCCTTAGAGTCACTTGCCTATCTTAAATACATCAACTTTTCATACAATAGATTACAAGGAGAGATTCCCAATGGAGGACCTTTCAAAAATTTCACAGCTCAATCTTTCATGCATAATGAAGCACTTTGTGGCAATCCTCACCTACAAGTGCCTCCATGTGGTAAACAAGTTAGGCAAAGGTCGGTGACAAAGAAGCTATTAATCAAATGCATACCACCCTTAATTGTGTCAATCATTTTGATTGCTGCATGTGTAGTACTCCTACAGCGTAAAAGGAAAAAGGTTGAGAATCCACTTGAAAGGGATTTATCAACTTTAAGAGTTCCAAGAAGAATATCCTATTATGAAATTGTAAAAGCAACTAATGGATTCAGTGAGAGTAATTTACTTGGAAAGGGGAGCTTTGGTTCTGTGTATCAAGGGATGCTCTCCAGCGGGATAATGGTTGCAATTAAAGTAATTGATTTGGACTCGGAAGCATCATCAGGGAGCTTTGATGTAGAATGCAATGCAATGCGCAATCTACGACATCGAAATCTTGTTAAGATTATTAGTAGTTGTTCAAATGTTGATTTCAAATCTTTGGTGATGGATTTCATGTCAAATGGAAGTGTGGACCAATGGTTATACTCAAATAACTATTGTTTAGATTTCTTGCAAAGGTTGAATATAATGATAGACGTGGCATCTGCATTGGAATATCTCCATCACGGTTCTTTAATACCCGGTGGTTCATTGCGATCTGAAGCCAAGTAA 2910 0.3856 MACSAMSRRNITTDEFALLAFKSSITVDPYHMISNWSTSSSSSSLCNWVGVTCDWHHGRVKALNLSNMGLRGTISTQIGNLSFLVELDLHGNGFYGQLPQELFGLHRLKLLDLSNNDLVGGIPARVGDLSRLQHLNLGLNNLAGFIPQSMFNLSKLELLNCSFNFIKGTIPPVIGQLQQLKILDITNNTLSGTIPPTISNLSSLEEIHLNHNSLSGGIPKGIGDLTQLRRLHLRNNQLSGHISSTIFNNSLLQHFVLGFNNLSGDLPSNICQGLPKLKLLYLPYNDLSADIGNLTKLRYLYLRSNNLEGEIPVSLLNLSSLREVSLEENNLNGSVPQEMCHQLPQLQVFSLTSNQIEGSIPRSIGNCTSLKELNLGYNYLTGSIPMEIGDLHELETAGILPSSMGYGLPNLEELFMHENKLVGNIPNGISNASKLIELDLSGNEFNGIIPNIFGDLTVLEWLGIEENNLTLEFNFFTSLTSCRHLTHLDVSKNKLLSKLPKSIGNLSKSLEYFSAASCRIYGNIPLEIGNISNLISLSLSENDINGPMPSTFKKLQKLQYLGLDFNGLQGSIVDELCEIKSLSELYLTNNKLSGELPTCFGNMTSLRKVYLGSNRLISGIPSYFWSLKDILMLNLSSNALIGNLPPEIGQLRALILLDLSRNQISSNIPATISFLKTLQTLSLAHNKLQGSIPKSLGEMVSLSFLDLSQNLLSGGIPKSLESLAYLKYINFSYNRLQGEIPNGGPFKNFTAQSFMHNEALCGNPHLQVPPCGKQVRQRSVTKKLLIKCIPPLIVSIILIAACVVLLQRKRKKVENPLERDLSTLRVPRRISYYEIVKATNGFSESNLLGKGSFGSVYQGMLSSGIMVAIKVIDLDSEASSGSFDVECNAMRNLRHRNLVKIISSCSNVDFKSLVMDFMSNGSVDQWLYSNNYCLDFLQRLNIMIDVASALEYLHHGSLIPGGSLRSEAK* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00732 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 478 775 - -
Rops11g00732 969 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 401 959 - -
Rops11g00732 969 Pfam Leucine Rich Repeat 296 318 IPR001611 GO:0005515
Rops11g00732 969 Pfam Leucine Rich Repeat 484 506 IPR001611 GO:0005515
Rops11g00732 969 Gene3D Transferase(Phosphotransferase) domain 1 918 960 - -
Rops11g00732 969 Pfam Protein tyrosine and serine/threonine kinase 846 958 IPR001245 GO:0004672|GO:0006468
Rops11g00732 969 Gene3D Ribonuclease Inhibitor 398 473 IPR032675 -
Rops11g00732 969 Pfam Leucine rich repeat N-terminal domain 13 54 IPR013210 -
Rops11g00732 969 SMART LRR_sd22_2 699 725 - -
Rops11g00732 969 SMART LRR_sd22_2 105 124 - -
Rops11g00732 969 SMART LRR_sd22_2 482 508 - -
Rops11g00732 969 SMART LRR_sd22_2 408 440 - -
Rops11g00732 969 SMART LRR_sd22_2 603 622 - -
Rops11g00732 969 SMART LRR_sd22_2 343 375 - -
Rops11g00732 969 SMART LRR_sd22_2 675 696 - -
Rops11g00732 969 SMART LRR_sd22_2 177 203 - -
Rops11g00732 969 SMART LRR_sd22_2 294 320 - -
Rops11g00732 969 FunFam Serine-threonine protein kinase plant-type 822 917 - -
Rops11g00732 969 ProSiteProfiles Protein kinase domain profile. 842 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00732 969 Gene3D Ribonuclease Inhibitor 474 779 IPR032675 -
Rops11g00732 969 Gene3D Phosphorylase Kinase; domain 1 824 917 - -
Rops11g00732 969 ProSitePatterns Protein kinases ATP-binding region signature. 848 870 IPR017441 GO:0005524
Rops11g00732 969 FunFam Leucine-rich repeat receptor protein kinase EMS1 194 288 - -
Rops11g00732 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 289 475 - -
Rops11g00732 969 SMART LRR_typ_2 177 200 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 343 367 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 699 723 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 482 506 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 579 602 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 318 342 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 408 432 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 129 153 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 225 249 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 603 627 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 294 317 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 651 675 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 81 105 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 433 455 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 531 554 IPR003591 -
Rops11g00732 969 SMART LRR_typ_2 201 224 IPR003591 -
Rops11g00732 969 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 11 174 - -
Rops11g00732 969 SUPERFAMILY RNI-like 392 742 - -
Rops11g00732 969 Pfam Leucine rich repeat 409 469 IPR001611 GO:0005515
Rops11g00732 969 Pfam Leucine rich repeat 179 238 IPR001611 GO:0005515
Rops11g00732 969 Pfam Leucine rich repeat 581 640 IPR001611 GO:0005515
Rops11g00732 969 Pfam Leucine rich repeat 656 712 IPR001611 GO:0005515
Rops11g00732 969 Pfam Leucine rich repeat 328 380 IPR001611 GO:0005515
Rops11g00732 969 Gene3D Ribonuclease Inhibitor 169 269 IPR032675 -
Rops11g00732 969 Gene3D Ribonuclease Inhibitor 11 168 IPR032675 -
Rops11g00732 969 SUPERFAMILY RNI-like 86 456 - -
Rops11g00732 969 Gene3D Ribonuclease Inhibitor 340 397 IPR032675 -
Rops11g00732 969 Gene3D Ribonuclease Inhibitor 270 339 IPR032675 -
Rops11g00732 969 SUPERFAMILY Protein kinase-like (PK-like) 822 955 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00732 Rops-Chr11 10393007 10402291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00732 178 954 Receptor kinase-like Gene Family AT3G47570 36.273 6.63e-137 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops11g00732 PK_Tyr_Ser-Thr 2.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00732 - K13420 mtr:25481440 975.696