Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00726 ATGGCTTGCTCCGCTATGAGTCGAAGAAACATCACCACCGATGAATTTGCGCTTCTTGCGTTCAAATCCTCCATTACTGTAGACCCCTATCATATGATCAGTAATTGGTCAACCTCCTCTTCTTCTTCTTCTTTGTGCAATTGGGTTGGTGTCACTTGTGATTGGCACCATGGAAGAGCGAAGGCTTTGAATCTGAGTAATATGGGCCTTAGAGGTACCATTTCCCCACAACTTGGGAATCTCTCCTTCCTTGTTGAGCTTGACCTCCATGGCAATGGCTTCTATGGTCAGTTGCCACAAGAGTTATTTGGGTTGCACCGACTGAAGTTGCTTGACTTGAGCAACAACGAGCTTGTTGGAGGAATCCCTGCGAGGATAGGGGACTTATCAAGACTTCAACATTTGAATCTTGGCCTTAATAATCTTGCTGGTTTTATCCCACACTCTATGTTCAACTTGTCAAAGTTGGAGCTCCTAAATTGCTCATTCAATTTCATCAAAGGGACCATTCCACCTGTGATTGGTCAACTTCAGCAGTTGAAGATTTTGGATATTACAAATAACACGCTGTTGGGAACCATACCACCAACAATTTCCAACCTGTCTTCACTTGAAGAAATCCAATTAAATCATAACTCCTTATCAGGAGGAATTCCGAAAGGGATTGGTGATCTTACACAACTAAGAAGATTGCACCTTCGAAATAATCAGCTTTCAGGAAATATATCACCGACCATATTCAACAACTCATTGTTGCAATACATTGTTCTTAGTCATAATAATCTATCCGGTAATCTTCCGTCAAATGTTTGTCAAGGACTTCCTGAACTTAAAGTACTTCAACTTCAGTACAATGATCTTTCTGGTAAGATACCGACTGTTTGGCATCAATGCAAAGAGTTGGAAGAGTTAAAACTATCCTTCAATAATTTCGACAAGGGACGTCTGCCAGCCGACATCGGAAACTTGACCAAGCTTCAATATTTATATCTTCACAGCAACAACTTGGAAGGTGAAATCCCAGTCTCCCTTTTAAATCTCTCTTCTTTGAGGGTGGTCAGCCTTTCAAGAAACAATTTAAATGGAAGTGTCCCCCGGGAGATGTGTCATCAGCTTCCTCAACTTCAAGCATTTAGTTTCAACACTAATCAATTTGAAGGAAGCATTCCAAGATCAATTGGCAACTGCACATCACTTAAAGGGTTATACTTAGCGCACAACTACCTGGCAGGTTCAATACCCATAGAGATTGGTGATCTTTGTCAACTTGAGATTGTGGTATTAGGATTTAACAACTTGAGTGGACTTATTCCTTCAAAACTCCTCAACATTTCAACATTGACATACTTGCATCTTGCAAACAATTCTCTCTCAGGCATTCTTCCATCAGACATGGGATATGGCCTTACTAACCTGGAAGAGCTATACCTGTTTGAAAACAAACTTGTTGGAAACATTCCAAATGGAATATCCAATGCTTCTAAGCTAATTAAATTTGATTTAAGTGGCAATGAATTCAGCGGAATCATACCCAACGTATTTGGAGATTTAACAGTCCTCGAAATGCTCAACGTAGGAGAGAATAATTTGACACTTGAATTGAATTTCCTTAATTCGCTGACAAGTTGCAGATATTTGACAGTTCTGGGCCTTGCATGGAATAGTTTACTATCAAAACTTCCTAAATCAATTGGGAACTTATCTATGTCTCTAGAAACATTTATTGTAGATTCTTGCAAAATTTATGGCAATATTCCGCTTGAAATCGGAAACATGAGCAACTTGGTACTTTTATCTTTAAGTGGGAACGATATTAATGGACCAATGCCTGGTACAATCAAAGGGTTACAGAAACTACAATATTTGGGTCTTGACTTTAATGGACTGCAAGGATCCATCGTTGATGAGCTGTGTGAAATTAGGAGTTTGAGTGAGTTGTATCTAACCAACAACAAGTTTTCTGGAGAGTTGCCAACATGCTTTGGAAACATGACTTCTCTTAGAAAGGTATACATAGGATCTAACAAATTGATCTCTTGGATACCTTCCTCTTTTTGGAGTCTCAAAGATATCTTAGAGGTAAACTTATCCTCCAATGCTTTAATTGGAAATCTTCCACCTGAGATTGGGAAATTGAGAGCTCTTATTCTACTAGATTTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATCAGTTTCTTGATAACTTTGCAGACTCTCTCCTTAGCGCATAATAAATTGCAAGGGTCTATCCCTGCATCACTTGGTAAAATGGTAAGCTTGAGCTTCTTGGACTTATCCCAGAATCTTTTGTCTGGTGGGATTCCAAAATCCTTGGAATCACTTGCTTATCTTAAATACATCAATTTATCATACAATAGATTACAAGGAGAGATTCCCAATGGAGGACCTTTCAAAAATTTCACAGCTCAATCTTTCATGCATAATGAAGCACTCTGTGGCAATCCTCACCTACAAGTACCTCCATGTGGTAAACAAGTTCGGCGAAGGTCAGTGACAAAGAAGCTATTAATCAAATGCATACCACCCTTAATTGTGTCAATCATTTTGATTGCTGCATGTGTAATACTCCTACAACGTAAAAGGAAAAGGGTTGAGAATCCACTTGAAAGGGATTTATCAACTTTAAAAGTTCCAAGAAGAATATCCTATTATGAAATTGTAAAAGCAACTGATGGATTCAGTGAGAGTAATTTACTTGGAAAGGGGAGCTTTGGTTCTGTGTATCAAGGGATGCTCTCCAGCGGGATAATGGTTGCAATTAAAGTAATTGATTTGGACTTGGAAGCATCATCAAGGAGCTTTGATGTAGAATGTAATGCAATGCGCAATCTACGACATCGAAATCTTGTTAAGATTATTAGTAGTTGTTCAAATGTTGATTTCAAATCTTTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGATCAATGGTTATACTCAAATAACTATTGTTTAGATTTCATGCAAAGGTTGAATATAATGATAGACGTGGCATCTGCATTGGAATATCTCCATCACGGTTCTTTAATACCAGTGGTTCATTGCGATCTGAAGCCTAGTAATGTTTTACTGGATGAAAACATGATTGCACATGTCAGCGATTTTGGCATTGCCAAGCTCTTAGATGAAGGACAATCTAAAACTCATACCGAGACCTTGGCTACTCTTGGTTACGTTGCACCAGAGTATGGATCGAAGGGAACTATTTCTGTCAAAGGAGATGTGTACAGTTATGGGATTATGTTAATGGAAATGTTCACAAGAAAGAAGCCAACAGATGATATGTTTGTGGCAGGAATGAGCTTGAAATATTGGATTAGCGAGTCAATGCCCAATTCAATCATGGAAGTTGTGGATTCTAATTTAGTCCAACAATATGGGGAACAAATTAATGACATATTGGCTCACATATCATCTATTTTGGAACTAGCCTTGAGTTGTTGTGTAGATTCACCTGAGGCACGAATTACCATTACAGATGTCATTCTGTCATTAACCAATATCAAGACCCAGTTCACATCCAATCTTTGA 3561 0.3856 MACSAMSRRNITTDEFALLAFKSSITVDPYHMISNWSTSSSSSSLCNWVGVTCDWHHGRAKALNLSNMGLRGTISPQLGNLSFLVELDLHGNGFYGQLPQELFGLHRLKLLDLSNNELVGGIPARIGDLSRLQHLNLGLNNLAGFIPHSMFNLSKLELLNCSFNFIKGTIPPVIGQLQQLKILDITNNTLLGTIPPTISNLSSLEEIQLNHNSLSGGIPKGIGDLTQLRRLHLRNNQLSGNISPTIFNNSLLQYIVLSHNNLSGNLPSNVCQGLPELKVLQLQYNDLSGKIPTVWHQCKELEELKLSFNNFDKGRLPADIGNLTKLQYLYLHSNNLEGEIPVSLLNLSSLRVVSLSRNNLNGSVPREMCHQLPQLQAFSFNTNQFEGSIPRSIGNCTSLKGLYLAHNYLAGSIPIEIGDLCQLEIVVLGFNNLSGLIPSKLLNISTLTYLHLANNSLSGILPSDMGYGLTNLEELYLFENKLVGNIPNGISNASKLIKFDLSGNEFSGIIPNVFGDLTVLEMLNVGENNLTLELNFLNSLTSCRYLTVLGLAWNSLLSKLPKSIGNLSMSLETFIVDSCKIYGNIPLEIGNMSNLVLLSLSGNDINGPMPGTIKGLQKLQYLGLDFNGLQGSIVDELCEIRSLSELYLTNNKFSGELPTCFGNMTSLRKVYIGSNKLISWIPSSFWSLKDILEVNLSSNALIGNLPPEIGKLRALILLDLSRNQISSNIPTTISFLITLQTLSLAHNKLQGSIPASLGKMVSLSFLDLSQNLLSGGIPKSLESLAYLKYINLSYNRLQGEIPNGGPFKNFTAQSFMHNEALCGNPHLQVPPCGKQVRRRSVTKKLLIKCIPPLIVSIILIAACVILLQRKRKRVENPLERDLSTLKVPRRISYYEIVKATDGFSESNLLGKGSFGSVYQGMLSSGIMVAIKVIDLDLEASSRSFDVECNAMRNLRHRNLVKIISSCSNVDFKSLVMEFMSNGSVDQWLYSNNYCLDFMQRLNIMIDVASALEYLHHGSLIPVVHCDLKPSNVLLDENMIAHVSDFGIAKLLDEGQSKTHTETLATLGYVAPEYGSKGTISVKGDVYSYGIMLMEMFTRKKPTDDMFVAGMSLKYWISESMPNSIMEVVDSNLVQQYGEQINDILAHISSILELALSCCVDSPEARITITDVILSLTNIKTQFTSNL* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00726 1186 Pfam Protein kinase domain 904 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00726 1186 FunFam Piriformospora indica-insensitive protein 2 269 366 - -
Rops11g00726 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1022 1034 IPR008271 GO:0004672|GO:0006468
Rops11g00726 1186 SMART LRR_typ_2 323 346 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 444 468 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 177 201 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 372 396 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 712 736 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 129 153 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 664 687 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 640 663 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 347 371 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 592 615 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 225 249 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 81 105 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 469 493 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 274 297 IPR003591 -
Rops11g00726 1186 SMART LRR_typ_2 760 784 IPR003591 -
Rops11g00726 1186 SUPERFAMILY L domain-like 383 486 - -
Rops11g00726 1186 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 367 542 - -
Rops11g00726 1186 Gene3D Phosphorylase Kinase; domain 1 884 978 - -
Rops11g00726 1186 ProSitePatterns Protein kinases ATP-binding region signature. 909 931 IPR017441 GO:0005524
Rops11g00726 1186 ProSiteProfiles Protein kinase domain profile. 903 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00726 1186 Gene3D Ribonuclease Inhibitor 272 368 IPR032675 -
Rops11g00726 1186 Gene3D Ribonuclease Inhibitor 170 271 IPR032675 -
Rops11g00726 1186 SMART LRR_sd22_2 225 244 - -
Rops11g00726 1186 SMART LRR_sd22_2 105 131 - -
Rops11g00726 1186 SMART LRR_sd22_2 177 203 - -
Rops11g00726 1186 SMART LRR_sd22_2 760 786 - -
Rops11g00726 1186 SMART LRR_sd22_2 469 488 - -
Rops11g00726 1186 SMART LRR_sd22_2 592 618 - -
Rops11g00726 1186 SMART LRR_sd22_2 323 349 - -
Rops11g00726 1186 Pfam Leucine rich repeat 179 238 IPR001611 GO:0005515
Rops11g00726 1186 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Rops11g00726 1186 Pfam Leucine rich repeat 641 701 IPR001611 GO:0005515
Rops11g00726 1186 Pfam Leucine rich repeat 738 797 IPR001611 GO:0005515
Rops11g00726 1186 Pfam Leucine rich repeat 422 482 IPR001611 GO:0005515
Rops11g00726 1186 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 11 172 - -
Rops11g00726 1186 Pfam Leucine rich repeat N-terminal domain 13 54 IPR013210 -
Rops11g00726 1186 SUPERFAMILY RNI-like 468 803 - -
Rops11g00726 1186 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 416 1176 - -
Rops11g00726 1186 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 979 1186 - -
Rops11g00726 1186 FunFam Leucine-rich repeat receptor protein kinase EMS1 173 268 - -
Rops11g00726 1186 Gene3D Ribonuclease Inhibitor 468 533 IPR032675 -
Rops11g00726 1186 Gene3D Ribonuclease Inhibitor 369 467 IPR032675 -
Rops11g00726 1186 Gene3D Ribonuclease Inhibitor 11 169 IPR032675 -
Rops11g00726 1186 SUPERFAMILY Protein kinase-like (PK-like) 883 1175 IPR011009 -
Rops11g00726 1186 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 543 836 - -
Rops11g00726 1186 SMART serkin_6 903 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00726 1186 Gene3D Ribonuclease Inhibitor 534 840 IPR032675 -
Rops11g00726 1186 SUPERFAMILY L domain-like 32 375 - -
Rops11g00726 1186 Gene3D Transferase(Phosphotransferase) domain 1 979 1185 - -
Rops11g00726 1186 FunFam Serine-threonine protein kinase plant-type 883 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00726 Rops-Chr11 10288832 10303350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00726 580 821 Receptor kinase-like Gene Family AT3G47570 29.918 1.51e-20 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops11g00726 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00726 - K13420 gmx:100784397 1323.92