Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00725 ATGGCTTGCTCCGCTATGAGTCGAAGAAACATCACCACCGATGAATTTGCGCTTCTTGCGTTCAAATCCTCCATTACTGTAGACCCCTATCATATGATCAGTAATTGGTCAACCTCCTCTTCTTCTTCTTCTTTGTGCAATTGGGTTGGTGTCACTTGTGATTGGCACCATGGAAGAGTGAAGGCTTTGAATCTGAGTAACATGGGCCTTAGAGGTACCATTTCCCCACAACTGGGGAATCTCTCCTTCCTTGTTGAGCTTGACCTCCATGGCAATGGCTTCCAAGGTCAGTTGCCCCAAGAGTTATTTGGGTTGCACCGACTGAAGTTGCTTGACTTGAGCAACAACGAGTTTGTTGGAGGAATCTCAGCGGGGGTAGGGGACTTATCAAGACTTCAACATTTGAATCTTGGCCTTAATAATCTTGCTGGTTTTATCCCACAATCTATATACAACTTGTCAAAGTTAGAGCTCCTAAATTGCTCATACAATTTCATCAATGGGACCATTCCACCTGTGATTGGTCAACTTCGTCAGTTGAAGATTTTGGATATTACAAATAACACGCTGTCGGGAACCATACCACTAACAATTTCCAACCTGTCTTCACTTGAAGAAATCCATTTAAATGATAACTCCTTATCAGGAGGAATTCCGAAAGGGATTGGTGACCTTACACAACTAGGAAGATTGCACCTTGGAAGTAATCAGCTTTCAGGCCATATATCATCCACAATATTCAACAACTCATTGTTGCAATATTTTGTTCTTGGTTATAATAATCTATCGGGTGATCTTCCATCAAATATTTGCCAAGGACTTCCCAAACTTAAAGCACTTCAACTTTACTACAATGATCTTTCTGGTAAGTTACCGACTGTTTGGCATCAATGCAAAGAGTTGGAAGTGTTAGTACTATCCTTCAATAATTTCGACAAAGGACGTCTGCCAGCCGACATCGGAAACTTGACCAAGCTTCAATATTTAATTCTTGAAAGCAACAACTTGGAAGGTGAAATTCCAGTCTCCCTTTTAAATATCTCTTCTTTGAGGGAGGTCAGCCTTGAAGAAAATAATTTAAATGGAAGTGTCCCACAGGAGATGTGTCATCAGCTTCCTCAACTTCAAATCTTTAGTTTAGGGACTAATCAAATTGAAGGAAGCATTCCAAGATCAATTGGCAACTGCACATCACTTAAAAAGTTATACTTAGGGTTCAACTATTTGGCAGGTTCAATACCCACAGAGATTGGTGATCTTCGTCAACTTGAGATTGTGTCATTGGGTTTTAACAACTTGAGTGGACCTATTCCTTCAAAACTCCTCAACATTTCAACGTTGACAATCTTGCATCTTGGAAACAATTCTCTCTCAGGCATTCTTCCATCAGACATGGGATATGGCCTTCCTAACCTGGAAGAACTCCACTTGTATACAAATAAACTTGTTGGAAACATTCCAAATGGTATATCCAATGCTTCTAAACTCATTAAACTCGACTTGAGTGGCAATGAATTCAACAGAATCATACCCAACGCATTTGGAGATTTAACAGTCCTCGAATGGCTCGATTCTTGCAGAATTTATGGCAATATTCCACTGAAAATAGGAAACATAAGCAACTTGATAAGTTTATCTTTGAGTGAGAATGATATAAATGGTCCAATGCCTAGTACATTTAAAAGGTTACAGAAACTTCAGTATTTGGGTCTTGATTACAATGGATTGCAGGGATCCGTTGTCAATGAGCTTTGTGAAATTAGGAGTTTGAGTGAGTTGTATCTAACCAACAATAAACTTTCTGGAGCATTACCAACATGCTTGGGGAATATGACTAATCTTAGAAAGGTACACATAGGATCCAATGGAGTGATCTCTGGGATACCTTCCTCTTTTTGGATTCTCAAAGATATCTTAGAGGTAAACTTATCCTCCAATGCTTTAATTGGAAATCTTCCACCTGAGATTGGGCAATTGAGAGCTCTTATTCTACTAGATTTATCAAGAAATCAGATTTCAAGCAACATTCCTGCAACCATTAGTTTCTTGAAAACATTGCAAACTCTCTCCTTAGCGCATAACAAATTGCAAGGGTCTATTCCTAAATCACTTGGCGAAATGGTAAGCTTGAGCTTCTTGGATTTATCCCAAAATCTTTTGTCTGGTGGGATTCCAAAATCCTTAGAGTCACTTGCCTATCTTAAATACATCAACTTTTCATACAATAGATTACAAGGAGAGATTCCCAATGGAGGACCTTTCAAAAATTTCACAGCTCAATCTTTCATGCATAATGAAGCACTTTGTGGCAATCCTCACCTACAAGTGCCTCCATGTGGTAAACAAGTTAGGCAAAGCATCATCGGGAGCTTTGATGTAGAATGCAATGCAATGCGCAATCTACGACATCGAAATCTTGTTAAGATTATTAGTAGTTGTTCAAATGTTGATTTCAAATCTTTGGTGATGGATTTCATGTCAAATGGAAGTGTGGACCAATGGTTATACTCAAATAACTATTGTTTAGATTTCTTGCAAAGGTTGAATATAATGATAGACGTGGCATCTGCATTGGAATATCTCCATCACGGTTCTTTAATACCAGTGGTTCATTGCGATCTGAAGCCTAGTAATGTTTTACTGGATGAAAACATGGTTGCACATGTCAGCGATTTTGGCATTGCCAAGCTCTTAGATGAAGGACAATCTAAAACTCATACCGAGACCTTGGCTACTCTTGGCTACGTTGCACCAGAGTATGGATCGAAGGGAATTATTTCTGTCAAAGGAGATGTGTACAGTTATGGGATTATGTTAATGGAAATGTTCACAAGAAAGAAGCCAACAGATGATATGTTTGTGGCAGGAATGAGCTTGAAATATTGGATTAGTGAGTCAATGCCCAATTCAATCATGGAAGTTGTGGATTCTAATTTAGTACAACAATATGGGGAACAAATTAATGACATATTGCCTCACATATCATCTATTTTGGAACTAGCCTTGAGTTGTTGTGTAGATTCACCCGAGGCACGAATTACCATTACAAATGTCATTATGTCATTAACCAAAATCAAGACCCAGTTCACCCAATGA 3096 0.3886 MACSAMSRRNITTDEFALLAFKSSITVDPYHMISNWSTSSSSSSLCNWVGVTCDWHHGRVKALNLSNMGLRGTISPQLGNLSFLVELDLHGNGFQGQLPQELFGLHRLKLLDLSNNEFVGGISAGVGDLSRLQHLNLGLNNLAGFIPQSIYNLSKLELLNCSYNFINGTIPPVIGQLRQLKILDITNNTLSGTIPLTISNLSSLEEIHLNDNSLSGGIPKGIGDLTQLGRLHLGSNQLSGHISSTIFNNSLLQYFVLGYNNLSGDLPSNICQGLPKLKALQLYYNDLSGKLPTVWHQCKELEVLVLSFNNFDKGRLPADIGNLTKLQYLILESNNLEGEIPVSLLNISSLREVSLEENNLNGSVPQEMCHQLPQLQIFSLGTNQIEGSIPRSIGNCTSLKKLYLGFNYLAGSIPTEIGDLRQLEIVSLGFNNLSGPIPSKLLNISTLTILHLGNNSLSGILPSDMGYGLPNLEELHLYTNKLVGNIPNGISNASKLIKLDLSGNEFNRIIPNAFGDLTVLEWLDSCRIYGNIPLKIGNISNLISLSLSENDINGPMPSTFKRLQKLQYLGLDYNGLQGSVVNELCEIRSLSELYLTNNKLSGALPTCLGNMTNLRKVHIGSNGVISGIPSSFWILKDILEVNLSSNALIGNLPPEIGQLRALILLDLSRNQISSNIPATISFLKTLQTLSLAHNKLQGSIPKSLGEMVSLSFLDLSQNLLSGGIPKSLESLAYLKYINFSYNRLQGEIPNGGPFKNFTAQSFMHNEALCGNPHLQVPPCGKQVRQSIIGSFDVECNAMRNLRHRNLVKIISSCSNVDFKSLVMDFMSNGSVDQWLYSNNYCLDFLQRLNIMIDVASALEYLHHGSLIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLLDEGQSKTHTETLATLGYVAPEYGSKGIISVKGDVYSYGIMLMEMFTRKKPTDDMFVAGMSLKYWISESMPNSIMEVVDSNLVQQYGEQINDILPHISSILELALSCCVDSPEARITITNVIMSLTKIKTQFTQ* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00725 1031 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 11 171 - -
Rops11g00725 1031 Gene3D Transferase(Phosphotransferase) domain 1 830 1031 - -
Rops11g00725 1031 Gene3D Phosphorylase Kinase; domain 1 783 829 - -
Rops11g00725 1031 SMART LRR_typ_2 372 396 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 659 683 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 323 347 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 201 224 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 707 731 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 494 516 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 81 105 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 469 493 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 274 297 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 129 153 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 444 468 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 225 249 IPR003591 -
Rops11g00725 1031 SMART LRR_typ_2 587 610 IPR003591 -
Rops11g00725 1031 Pfam Protein kinase domain 791 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00725 1031 Pfam Leucine rich repeat 470 524 IPR001611 GO:0005515
Rops11g00725 1031 Pfam Leucine rich repeat 664 720 IPR001611 GO:0005515
Rops11g00725 1031 Pfam Leucine rich repeat 178 238 IPR001611 GO:0005515
Rops11g00725 1031 Pfam Leucine rich repeat 349 409 IPR001611 GO:0005515
Rops11g00725 1031 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 296 524 - -
Rops11g00725 1031 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 525 783 - -
Rops11g00725 1031 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 826 1031 - -
Rops11g00725 1031 SUPERFAMILY Protein kinase-like (PK-like) 781 1022 IPR011009 -
Rops11g00725 1031 SMART serkin_6 713 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00725 1031 FunFam Leucine-rich repeat receptor protein kinase EMS1 172 269 - -
Rops11g00725 1031 SUPERFAMILY L domain-like 469 780 - -
Rops11g00725 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 869 881 IPR008271 GO:0004672|GO:0006468
Rops11g00725 1031 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 463 - -
Rops11g00725 1031 Pfam Leucine rich repeat N-terminal domain 13 54 IPR013210 -
Rops11g00725 1031 SUPERFAMILY L domain-like 13 311 - -
Rops11g00725 1031 Gene3D Ribonuclease Inhibitor 467 782 IPR032675 -
Rops11g00725 1031 ProSiteProfiles Protein kinase domain profile. 713 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00725 1031 Gene3D Ribonuclease Inhibitor 271 369 IPR032675 -
Rops11g00725 1031 Gene3D Ribonuclease Inhibitor 370 466 IPR032675 -
Rops11g00725 1031 Gene3D Ribonuclease Inhibitor 11 168 IPR032675 -
Rops11g00725 1031 Gene3D Ribonuclease Inhibitor 169 270 IPR032675 -
Rops11g00725 1031 SUPERFAMILY RNI-like 269 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00725 Rops-Chr11 10261314 10271890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00725 13 1029 Receptor kinase-like Gene Family AT3G47570 33.207 2.90e-159 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops11g00725 Pkinase 5.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00725 - K13420 smil:131007582 788.489