Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00724 ATGGATCAAGCTGGAAGCAAAGGTAGAGGAGAGGTATTGGATCCGGTTCATGAAGGGGTTGATGAGAATTTAAGTGGTTTGGTTGAAGGGGTTGCAATTGATGCAGTAGAAGGGAGCAGCTTGGGTGACAGAGCTAGTATAATTGGAGAAGTTGGAACTTCAGGAAAGGTAGGTAAGGCTTCAGGATCCAATAATGAGCTAAAGGAGGAGCCTGTGGAAGTTAAGGGTCAGAACAATCATGTTCAAGAAAATATATGTGATAAAATACCTGGGGTTGATCAAGGAACGAGTTATAATTCAAACAATTTGGTTAATCCGGAAGTGCTTGAAACAGTGATTGTAGTAGAGTCTGTTCAGAATGAAAACAACAATGGAGATAATAGGAAATTGGAAGCAAAAGCTCATGAATCACGGTTGAGATTGGTATCCATGAAGGCACCAAAAGGGGTGTCTGAAACAGATAAAAATTCACGTGTGATTGATGTAAAGTGTAGCAGCTGCAAAGGGTATTATGAGAATTTTGAAGGTGAAAGGATTTGTAGGATTTGCCATCTGGCTTCTGGGCAGCCATCAGATGCAACCACTGTCGGTAATGCTATTAGTGCCACAAGTACAGATTTAATTCAGATTGGTTGTGCATGTAAAGATGAGCTAGGCATTGCACACATTCATTGTGCTGAGGCGTGGTTCAAGCTCAAGGGAAACGAGATGCAGGATAATGGATTAGGCATAAACATGATTAGCAAAATGATTCTATTGTTTGTGAGACGAGTTGTCATGATGAAGATTCTTTTGGATCTGATGTTTCTCTGTTCAGATGATATATGGAGCATGGACTAG 840 0.4071 MDQAGSKGRGEVLDPVHEGVDENLSGLVEGVAIDAVEGSSLGDRASIIGEVGTSGKVGKASGSNNELKEEPVEVKGQNNHVQENICDKIPGVDQGTSYNSNNLVNPEVLETVIVVESVQNENNNGDNRKLEAKAHESRLRLVSMKAPKGVSETDKNSRVIDVKCSSCKGYYENFEGERICRICHLASGQPSDATTVGNAISATSTDLIQIGCACKDELGIAHIHCAEAWFKLKGNEMQDNGLGINMISKMILLFVRRVVMMKILLDLMFLCSDDIWSMD* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00724 279 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 173 240 IPR013083 -
Rops11g00724 279 SMART ringv_2 179 236 IPR011016 GO:0008270
Rops11g00724 279 PANTHER ZINC FINGER, RING-CH-TYPE 66 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00724 Rops-Chr11 10256836 10259114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00724 175 237 C3H Transcription Factor Family AT5G05830 42.857 6.60e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00724 - - gmx:100791720 318.931