Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00717 ATGAAGTTCACTTGCAGATTGTTGATTTTTCTGGCTCTGGTTGCTCTAGTTGAATCTTCATGCAATAGTGGAGACCAGGACCTGGTTTCAAAGGCCTTTCAATCTGTTTCTGGATTCAACTCTTCCTGGTTTCAAAGAAGAGATTTCAACTGTTCAAAGGCTCAGATAAAGAGAATAGAGCTTCCATCCAGAAACTTGAGAGGGAGTATCTCATGGAGGTATCTGAGGAACATGTCAAAGTTGGAGGTTCTAGATCTTTCTGGGAATTATCTTCAAGGCCAGGTGCCAAACTGGTTTTGGGCAAGCTCCACCTTATTGGTAGTGAATCTTTCCAAGAACAGGTTCGGAGGGAGTGTAGCATTGAAACCCACTTCACAAAATGGTTCCTTTTCATCACTTCAAACGCTCAATCTCTCACATAACAGGTTCACCAATCTGGTTCACCTCTCTGGTTTTTCAAACCTGAAAAGTCTCGACTTTTCGTACAACAAGCTGGGAACTTTACCTTCAGGGTTCCAAAACCTCACCAACCTACACCACCTCGATCTCTCAAACTGCAACATCAAAGGAAACGTGAAACCCCTTTCTTCCCTTGCCTCACTTTCCTACTTGGACCTGTCAAACAATACTTTGAATGGTAGTTTCCCTTCTGATTTCCCTCCTCTAAACGCCATCAAATTCTTGAACATCTCACACAACAATTTCAAAGCATCGGTTACCTTGGACAGGTTCAAAAATTTTGGCAAATCAGCATTCATTCACGCTGGTAACAACTTCAACTACTACAACGCATCCAAAACGCCAAACCTTCATTCAAACCCACCCCACATGGAAAAACCAAAGCCCAAGATATCCAAAAACAAACATAAGTCAAAAACAAAAACCAAAACCAAAACCAAAACCGTGGTTGCTTCAGTGTCCTCTGCGTCAGCACTTGTCCTTGTCGTGTTATGCATATGGGCATTGTTTGGTTACAGAAAGAAGAGGCAATTGGCAAAAAGGAACAAATGGGCAATCTCAAAACCGATTCCATTCACCGTTAAGATGGAGAAATCAGGACCGTTCGCTTTTGAAACTGAGTCGGGTACTTCTTGGGTGGCTGACCTAAAGGAACCATCTTCAGCACCAGTGGTCATGTTCGAGAAGCCCTTGTTGAACCTCACCTTCGTTGACCTCTTGGCTGCCACGTCACACTTTGGCAAGGACTCTCAGCTAGCAGAGGGTAGGTGTGGGCCCGTCTATCGAGCTGTCTTACCAGGAGACATCCACGTGGCAATCAAGGTCCTAGAAAATGCTAGAGACGTTGATCATGATGACGCTGTTTCGACCTTTGTTGACCTAGCTCAGCTCAAACACCCTAACCTGTTGCCCCTATCTGGTTACTGCATTGCAGGGAAGGAAAAGCTTGTATTATACGAGTTTATGTCAAACGGGGATTTAGGTAGGTGGCTACGCGAGTTACCGACGGGTGAGACTAACGTGGAGGATTGGAGTGGTGACACGTGGGAGATTCAAAACGGCGTCGGTTCGAGAGCTTCATCCCCTGAAAAGATGGGTTGGCCAACACGACACCGTATCGCGGTGGGTGTAGCACGTGGGTTAGCTTTCCTCCACCACGCGGGGTCGAAGCCCGTCGTGCACGGTCATCTGGTAACGTCAAACATTCTCCTCGCCGATGATTTCGAGCCCCGAATCGCCGATTTCGGGTTCCGAAAAATCGGCCCCCCGAATTGCAGCACCGAAACGGACGTTTATTGCTTCGGTGTGGTGCTGATGGAGCTTGTAACGGGGAGGCCCGGCACGGCGGAGACGGTGGTTTGGGTTAGGAAGCTCGTGAGGGAGGGTCACGGGGTGAGGACACTCGACGAGAGGCTCCAACTCGGTGGTGCTGACTCGGAGAGTGAGATGGTTGAGACTCTCCGAGTCGCGTATTTATGTACGGCCGAGTCACCGGCGAAGAGGCCCACCATGCAACAGATTTTGGGTCTTCTCAAAGATATTCATCCTAGTCGTGGACTCGACTGA 2025 0.48 MKFTCRLLIFLALVALVESSCNSGDQDLVSKAFQSVSGFNSSWFQRRDFNCSKAQIKRIELPSRNLRGSISWRYLRNMSKLEVLDLSGNYLQGQVPNWFWASSTLLVVNLSKNRFGGSVALKPTSQNGSFSSLQTLNLSHNRFTNLVHLSGFSNLKSLDFSYNKLGTLPSGFQNLTNLHHLDLSNCNIKGNVKPLSSLASLSYLDLSNNTLNGSFPSDFPPLNAIKFLNISHNNFKASVTLDRFKNFGKSAFIHAGNNFNYYNASKTPNLHSNPPHMEKPKPKISKNKHKSKTKTKTKTKTVVASVSSASALVLVVLCIWALFGYRKKRQLAKRNKWAISKPIPFTVKMEKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLLNLTFVDLLAATSHFGKDSQLAEGRCGPVYRAVLPGDIHVAIKVLENARDVDHDDAVSTFVDLAQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLRELPTGETNVEDWSGDTWEIQNGVGSRASSPEKMGWPTRHRIAVGVARGLAFLHHAGSKPVVHGHLVTSNILLADDFEPRIADFGFRKIGPPNCSTETDVYCFGVVLMELVTGRPGTAETVVWVRKLVREGHGVRTLDERLQLGGADSESEMVETLRVAYLCTAESPAKRPTMQQILGLLKDIHPSRGLD* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00717 674 Pfam Leucine Rich Repeat 80 99 IPR001611 GO:0005515
Rops11g00717 674 Pfam Protein tyrosine and serine/threonine kinase 402 571 IPR001245 GO:0004672|GO:0006468
Rops11g00717 674 FunFam Calmodulin-binding receptor kinase CaMRLK 131 241 - -
Rops11g00717 674 Gene3D Transferase(Phosphotransferase) domain 1 475 577 - -
Rops11g00717 674 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 49 667 - -
Rops11g00717 674 Gene3D Ribonuclease Inhibitor 28 123 IPR032675 -
Rops11g00717 674 MobiDBLite consensus disorder prediction 268 299 - -
Rops11g00717 674 MobiDBLite consensus disorder prediction 282 297 - -
Rops11g00717 674 ProSiteProfiles Protein kinase domain profile. 399 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00717 674 PRINTS Leucine-rich repeat signature 198 211 - -
Rops11g00717 674 PRINTS Leucine-rich repeat signature 133 146 - -
Rops11g00717 674 FunFam Putative LRR receptor-like serine/threonine-protein kinase 360 474 - -
Rops11g00717 674 SMART LRR_typ_2 198 221 IPR003591 -
Rops11g00717 674 SMART LRR_typ_2 78 101 IPR003591 -
Rops11g00717 674 SMART LRR_typ_2 130 151 IPR003591 -
Rops11g00717 674 SMART LRR_typ_2 152 174 IPR003591 -
Rops11g00717 674 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Rops11g00717 674 SUPERFAMILY L domain-like 54 238 - -
Rops11g00717 674 ProSiteProfiles Leucine-rich repeat profile. 132 153 IPR001611 GO:0005515
Rops11g00717 674 ProSiteProfiles Leucine-rich repeat profile. 154 176 IPR001611 GO:0005515
Rops11g00717 674 Pfam Leucine rich repeat 132 188 IPR001611 GO:0005515
Rops11g00717 674 Gene3D Ribonuclease Inhibitor 124 312 IPR032675 -
Rops11g00717 674 Gene3D Phosphorylase Kinase; domain 1 359 474 - -
Rops11g00717 674 Gene3D Transferase(Phosphotransferase) domain 1 578 672 - -
Rops11g00717 674 SUPERFAMILY Protein kinase-like (PK-like) 376 664 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00717 Rops-Chr11 10162569 10165261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00717 58 667 Receptor kinase-like Gene Family AT5G07280 31.459 3.88e-73 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Rops11g00717 PK_Tyr_Ser-Thr 5.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00717 - - gmx:100778920 1045.03