Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00714 ATGGAGAACAAATCAACAATTCTGATGCAAAGGTATGAACTTGGACGCCTGCTTGGCCAAGGCAATTTTGCCAAAGTTTACCGTGCAAAGAACTTGAAGACAGGCCAGAGTGTTGCCATCAAAGTAATCAACAAAGAGAAGATCATGAGGGTTGGTTTAAAGGATCAAATCAAGCGTGAAATCTCTGTGATGCGTCTTGTGAGGCACCCCAACATTGTGCAGCTTTATGAGGTCATGGCAAGCAAAACAAAGATATATTTTGCAATGGAATATGTGAAAGGTGGTGAGCTTTTTCGTAAATTGTCCCGAGGGAAGCTGAGGGAAAATATGGTCAGAAAATATTTCCAACAGTTGATTGATGCTGTTGATCATTGCCACAGAAGAGGGGTTTATCACCGTGACCTTAAACCTGAGAACCTTCTCCTTGATGAAAATGGGGACCTCAAAGTTACAGACTTTGGTTTGAGTGCATTGTTAGAATCCAAGAAGAATGATGGGCTTCTTCACACAACATGTGGAACTCCAGCTTATGTAGCACCTGAGGTAATCAAGGAAAAAGGATATGATGGAGCCAAGGCAGATATTTGGTCTTGTGGGGTGATTCTCTATGTTCTTTTAGCAGGTTTTCTTCCTTTCAGTGACAAAAATCTAATGGAAATGTACAAGAATATTCTCAATGCAGATTTTGAGTTCCCACAGTGGTTCCATTCAGATGTGAGAAGGGTTATCTATAGAATCCTTGATCCCGATCCAGGGACAAGAGTTAGTATTACCAAGATCAGGCAAAGTGGTTGGTTTAGAAAGGGGTATAAGCAGATTGAAGCACCCCAATTGCCACCCTTGTCTCCTAGTGGTGAGGATATATCTGATGTTGAGGCTGCATTTGATTCATCAAGTTCAGATGGAAGCTCAATAACAAATAAAGAAGATAGCTCCATGAAGACATATTTTTTCAATGCATTTGATCTCATATCACTCTCTTCAGGATTTGATCTTTCTGGTCTGTTTGAGAAAGATGAGAATGAAAGACAGCAGGCAAGGTTTACTACTAAAGAACCACCTTGGGCAGTTGTGTCCAAACTTGAAGAGATAGCACAGATAGATGGTAGATTTAAGGTCATGAAGAAAAATGGGCTTGTTAGATTGGAGGGAAGCAACACAGGACAACTCAGTATAGATGCAGAAATTTTTGAACTTGCATCTTCCTTTCATATTGTTGAGGTGAAGAAAATTGCTGGAGACACATTGGAATATGGGGAATTCTGGAACCAGCACTTCAAGCCTTCTCTAAATGAAATAGTTTGGGCTTGGCAGCAGCAGTAG 1323 0.4074 MENKSTILMQRYELGRLLGQGNFAKVYRAKNLKTGQSVAIKVINKEKIMRVGLKDQIKREISVMRLVRHPNIVQLYEVMASKTKIYFAMEYVKGGELFRKLSRGKLRENMVRKYFQQLIDAVDHCHRRGVYHRDLKPENLLLDENGDLKVTDFGLSALLESKKNDGLLHTTCGTPAYVAPEVIKEKGYDGAKADIWSCGVILYVLLAGFLPFSDKNLMEMYKNILNADFEFPQWFHSDVRRVIYRILDPDPGTRVSITKIRQSGWFRKGYKQIEAPQLPPLSPSGEDISDVEAAFDSSSSDGSSITNKEDSSMKTYFFNAFDLISLSSGFDLSGLFEKDENERQQARFTTKEPPWAVVSKLEEIAQIDGRFKVMKKNGLVRLEGSNTGQLSIDAEIFELASSFHIVEVKKIAGDTLEYGEFWNQHFKPSLNEIVWAWQQQ* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00714 440 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00714 440 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00714 440 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Rops11g00714 440 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00714 440 FunFam Non-specific serine/threonine protein kinase 313 435 - -
Rops11g00714 440 Gene3D Transferase(Phosphotransferase) domain 1 3 319 - -
Rops11g00714 440 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Rops11g00714 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 420 - -
Rops11g00714 440 Gene3D Kinase associated domain 1, KA1 320 436 - -
Rops11g00714 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Rops11g00714 440 SUPERFAMILY Protein kinase-like (PK-like) 8 298 IPR011009 -
Rops11g00714 440 Pfam NAF domain 317 375 IPR004041 GO:0007165
Rops11g00714 440 FunFam Non-specific serine/threonine protein kinase 5 312 - -
Rops11g00714 440 CDD CIPK_C 319 431 - -
Rops11g00714 440 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00714 Rops-Chr11 10134796 10136437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00714 1 438 CBL-interacting serine-threonine protein kinases AT5G45820 62.217 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops11g00714 Pkinase 7.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00714 K07198 - gmx:100807927 672.93