Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00712 ATGGGAATGAGATGGAAAACATTTGGATTTTGGCTTAGAATTTATGTTTGCTTGATTTCTGTGTGGGGAACCCAAGAGTGTTGGTCCCTTAATGATGAAGGATTGGCTTTGTTGGATTTCCGTTCCAGAATAACTTGTGATCCTTGTGCTGCTTTGGCAAATTGGAATCCAAATGATTGTGACCCTTGCAAGTGGTCAGGTGTTCATTGTGTCGATGGTAAAGTGCAAATACTGGACCTAGATGGGCTATCTTTGGAAGGGACTTTGGCTCCTGAGCTAGGGAGGCTGAGTCACTTAAAATCTCTTGTGTTATGCAAGAATAACTTTTCTGGTTCAATTCCCAAAGAACTTGGAGATCTAACAAACCTGGAGTTATTGGATTTAAGGCAGAATAACTTGTCAGGAAGCATCCCAGCAGAAATTAGCAAGATGTCATTGCTAAAACACTTGTTGCTTTGGGACAATAAAATTGAAGGCGTTGATTCTCAAGATCAAGGAAATTTAAGATTTCCCTCTAGATCACTACTTGACGATTGTTCATCACATCTGACCACTTTATTTGCCTGCATGAATAGAAAGTTTGGACACTGGTTCAAGCACGGCCATGAAGAGAAATACTGTGATCTTGTCTCTAGTTCTAATGAGCAAGAGATAGCCCAGAATGTACCAAATCATGTCAATTCTGCACGTCGTAAGTTACTTGATCAGTCTAGTAACCTTGCAGCTGCACCTTATAGTGGTGAACCTACCATGGAGTTCAGTTCTGTTCCAACTACCATAAGTAGTGGATCTTTCCCAGCTGTGCCAGATGCCAATAAGAAACAGAATCAGTCACCAGCATCACCGCCTTCACCTTCTGATTCTCCTCCACATGATGCTTCTTCTGATGTAAATCAAACAAGTCAACAACATTCAGCTAAGGGTGGTTCTGGAAAGTTGTGGAAGTATATAATTATTATTATAGTTGTGGTTGTGTTGGTCATTGTTATCATAGTTATTCTTTGCATTTGGAGAAAACGAGCAGCAAAAATAATAAGCCCCTGGAAGACAGGAATAAGTGGACAATTACAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATAGAGCAGAATTAGAGACAGCTTGTGAGGATTTCAGCAATATCGTTATGAGTTTTGGAGCGTGCACCATATACAAAGGAACACTATCCAGTGGAGTTGAGATTGCTGTTGTTTCTACTCTGATTACTTCTTCCGAAGATTGGTCAAAGACCATGGAGATAAATTACCTGAAAAAGATTGATACTTTGTCCCGCATAAATCATAAGAACTTTATTAATCTTATTGGATACTGTAAGGAAGAAGAACCATTCACACGGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCCTATTTGAGTATCTTCATGTTAAGGAAGTTGAACGTCTTGATTGGAGTGAAAGGATGAGAATTATCATGGGCATTGCTTATTGTCTTCAGTACCTGCATCATGATTTGAATCCACCAATAGCTCAAAGCAGACTCACTTCAAATATGATTATGTTAACAGATGATTTTGCTGCTAAGATTGCAGAGGTCAGTTTTGGAAGCATTGTACCACCAATGACTACTGAAGGTGATTCAAAGAACTCTGAGTGGCCACCCCGTTCTGATCCTGAATCCAATGTCTATAACTTTGGAATATTGTTGCTTGAAATCATTTCTGGGAAATTGCCTTACTCTGAAGAAGAAGAAGGCAATCTTGTGAACTGGGCTGCTGATTACTTAAATGACAAGAGAAGCATCAGCTACATGATTGATCCCACCTTGCAATCTTTCAAGGACAATGAACTTGATGTCATCTGTGAGGTGATCCAAGATTGTATCCAACCTGATCCAAAGTTAAGACCTACAATGGGAGACATAACTTCCAAATTGAGGGAAGTGCTTGGTGTGTCACCCGAGCAAGCAGTCCCAAGACTTTCTCCACTTTGGTGGGCTGAACTGGAGATCTTGTCAGTGGAGGCAACTTAA 2016 0.4033 MGMRWKTFGFWLRIYVCLISVWGTQECWSLNDEGLALLDFRSRITCDPCAALANWNPNDCDPCKWSGVHCVDGKVQILDLDGLSLEGTLAPELGRLSHLKSLVLCKNNFSGSIPKELGDLTNLELLDLRQNNLSGSIPAEISKMSLLKHLLLWDNKIEGVDSQDQGNLRFPSRSLLDDCSSHLTTLFACMNRKFGHWFKHGHEEKYCDLVSSSNEQEIAQNVPNHVNSARRKLLDQSSNLAAAPYSGEPTMEFSSVPTTISSGSFPAVPDANKKQNQSPASPPSPSDSPPHDASSDVNQTSQQHSAKGGSGKLWKYIIIIIVVVVLVIVIIVILCIWRKRAAKIISPWKTGISGQLQKAFITGVPKLNRAELETACEDFSNIVMSFGACTIYKGTLSSGVEIAVVSTLITSSEDWSKTMEINYLKKIDTLSRINHKNFINLIGYCKEEEPFTRMMVFEYAPNGSLFEYLHVKEVERLDWSERMRIIMGIAYCLQYLHHDLNPPIAQSRLTSNMIMLTDDFAAKIAEVSFGSIVPPMTTEGDSKNSEWPPRSDPESNVYNFGILLLEIISGKLPYSEEEEGNLVNWAADYLNDKRSISYMIDPTLQSFKDNELDVICEVIQDCIQPDPKLRPTMGDITSKLREVLGVSPEQAVPRLSPLWWAELEILSVEAT* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00712 671 FunFam Nuclear pore complex protein NUP107 30 179 - -
Rops11g00712 671 Pfam Protein tyrosine and serine/threonine kinase 390 640 IPR001245 GO:0004672|GO:0006468
Rops11g00712 671 Gene3D Phosphorylase Kinase; domain 1 354 459 - -
Rops11g00712 671 SUPERFAMILY L domain-like 28 169 - -
Rops11g00712 671 PANTHER PROTEIN MALE DISCOVERER 2 13 669 - -
Rops11g00712 671 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Rops11g00712 671 Gene3D Ribonuclease Inhibitor 32 195 IPR032675 -
Rops11g00712 671 SUPERFAMILY Protein kinase-like (PK-like) 388 639 IPR011009 -
Rops11g00712 671 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Rops11g00712 671 ProSiteProfiles Protein kinase domain profile. 254 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00712 671 MobiDBLite consensus disorder prediction 290 308 - -
Rops11g00712 671 MobiDBLite consensus disorder prediction 264 281 - -
Rops11g00712 671 MobiDBLite consensus disorder prediction 264 308 - -
Rops11g00712 671 FunFam Inactive receptor-like serine/threonine-protein kinase 351 459 - -
Rops11g00712 671 Gene3D Transferase(Phosphotransferase) domain 1 460 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00712 Rops-Chr11 10119792 10124663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00712 14 645 Receptor kinase-like Gene Family AT2G42290 25.942 1.14e-50 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Rops11g00712 PK_Tyr_Ser-Thr 8.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00712 - - gmx:100786591 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00712 11 10119792 10124663 Rops11g00712 11 10119792 10124663 ECH