Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00702 ATGCCGGACTTCCACGATTCCCTCGCGCCGCCGTCACGTCCCGTCCCCGTCCGCGAGGATTGCTGGTCTGAGGAAGCTTCCTCAACGCTCGTCGACGCCTGGGGACGCCGTTATATGGAACTCAACCGTGGTAACCTCCGTCAGAAGGATTGGCAGGATGTGGCTGACGCCGTTAACGCACTTCACGGTCACACGAAGAAGACTCACCGCACCGATGTTCAGTGTAAGAATCGAATCGATACGATTAAGAAGAAGTATAAGGTCGAGAAGGCTAGGGTTTCGTCTTCAAACGGTGCCGTTTCTTCGACTTGGCCTTTCTTCGAACGATTGGATGCTTTGATTGGTCCTAATTTCAATGCGAAGAAATCTTCCTCTTCGCCATCGCCTTCGCCACCGGTGGCTCTTCCTTTGTTGCCGCATCGGAAGAACCCTAATTCTCTTGCGATTGTGGTTCCGCCGACGGCCGTGGCGCTGCCGCAGAAGCGGCCGGTGGCTATGTTGATGGATGATGGTTACTTCAGGAGGAATTATTCCGCGGTGGCGGCTGCGGCGGCTGCTGCGGAGGCTGATGAGGAGGAGGATGAAGAGGAGGAGGAGGAGGAAGTGGAGGAGGAAGAGGAAGATGAAGATGAAGGAAGAGGAAGTGAAGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGCTGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGGGAAGTTTATGAAAGAGTGGAGGCACAGAAACTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGCAGATGTTTATGGACACACAAGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGGTCTAACGATATGTATAGCTAG 894 0.5347 MPDFHDSLAPPSRPVPVREDCWSEEASSTLVDAWGRRYMELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKARVSSSNGAVSSTWPFFERLDALIGPNFNAKKSSSSPSPSPPVALPLLPHRKNPNSLAIVVPPTAVALPQKRPVAMLMDDGYFRRNYSAVAAAAAAAEADEEEDEEEEEEEVEEEEEDEDEGRGSEVEEGEKEREGLRRLAKAIERFGEVYERVEAQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00702 297 MobiDBLite consensus disorder prediction 120 139 - -
Rops11g00702 297 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 288 IPR044823 -
Rops11g00702 297 MobiDBLite consensus disorder prediction 1 20 - -
Rops11g00702 297 MobiDBLite consensus disorder prediction 183 226 - -
Rops11g00702 297 MobiDBLite consensus disorder prediction 187 216 - -
Rops11g00702 297 FunFam trihelix transcription factor ASIL2 22 88 - -
Rops11g00702 297 Coils Coil 179 209 - -
Rops11g00702 297 Gene3D - 22 88 - -
Rops11g00702 297 Pfam 60s Acidic ribosomal protein 159 212 - -
Rops11g00702 297 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Rops11g00702 297 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00702 Rops-Chr11 10025863 10032390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00702 18 296 Trihelix Transcription Factor Family AT3G14180 32.578 1.12e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops11g00702 Myb_DNA-bind_4 6.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00702 - - gmx:100815241 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00702 11 10025863 10032390 Rops11g00702 11 10025863 10032390 ECH