Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00693 ATGTGTGAAATGGCTCAAGTGCGAAGAGGCCAAGATATTCAAGGGATTAAGCTCTTTGGAGCAATGATTACATTGCATGGTGGGGAAGTAAATGAAGGGACAAAAGGAAGTGAAGATCAGACGGTTGAGAAGAGATCAGAGAAGATCATACCGTGTCCAAGATGCAAGAGCATGGAAACCAAATTCTGTTACTTCAACAATTACAACGTTAATCAACCGAGGCATTTCTGCAAGAGCTGTCAGAGGTACTGGACAGCTGGTGGAGCCCTCCGAAACGTGCCAGTTGGGGCTGGCCGGAGGAAGGCGAAGTCGCCGTGCCGTGAGGCGGGTGGATTCCCGGACGGTTGCCACTATGAAACTTCCGATGATGACCACAAGTTTGGGTTGGAGGAAGGCTTGGTTTTGGATAAGTGGCAGGTTTCAACGTCTCAGAGTGATTTCCGGCAAGTTTTTCCGGCCAAGAGGCGGAGGACGACTTCAGCTCAGCATCAAGGTCAATAA 501 0.495 MCEMAQVRRGQDIQGIKLFGAMITLHGGEVNEGTKGSEDQTVEKRSEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVPVGAGRRKAKSPCREAGGFPDGCHYETSDDDHKFGLEEGLVLDKWQVSTSQSDFRQVFPAKRRRTTSAQHQGQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00693 166 MobiDBLite consensus disorder prediction 144 166 - -
Rops11g00693 166 PANTHER CYCLIC DOF FACTOR 2 34 109 IPR045174 GO:0003700|GO:0006355
Rops11g00693 166 Pfam Dof domain, zinc finger 48 104 IPR003851 GO:0003677|GO:0006355
Rops11g00693 166 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Rops11g00693 166 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00693 Rops-Chr11 9870578 9872923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00693 11 157 C2C2-Dof Transcription Factor Family AT1G29160 54.167 3.35e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops11g00693 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00693 - - gmx:100820604 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00693 11 9870578 9872923 Rops11g00693 11 9870578 9872923 ECH