Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00673 ATGCGGCCTGACATGATACCAATGGAAGCTGAGAAGTGTGAAAATGAAGCAAGGACCAAGGAAGAGACGGAGGAAGCTATCAAACAACTGAGGAAGAGTTTAATGTTCAAAGCAACCCCTATGCCAACCTTTTACCATGAGGGGCCCCCACCTAAGGTTGAACTGAAGAAGCTACCACCCTCACGTGCAAAATCTCCAAAGCTGGGCAGGCGAAAGAGCAACAGTGGTGCATTTAATTTATCTAAAGGGAAGAAGGAGAAAGGGGCTGTTACTCAGAGAAAGCATCACGCACTTAGACCAACAAGTTCGCAGGAGAGAGCCACGACGACGAGGCAAGGATGGGATGGCCTTCTGGTTGGTGGGTCATGTGGGGCTATCCGTATCAATCCATGGAATGTTGAAGCAACTGTAGAGGCAATGAATGAGGCTATCTCAATGAGTGACGGAGGAAAACAGTTGCGACATGAAAAGCATTACCGGTATGACAACACTCATGATGTGGCTTACTGGTCACGTAGTTTCTTGCAAGACATGGGGAGGGCTTGCTCTGACCTCCTAAAGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTATGGCACTTGACCCTAATTTTAAAAAAAAAGGTAGGTTCTCAATTGATGCTATGGTTTCAGCTTACAAGAAGGCAAGGAGTAGGGCCATTTTGTTGGACTATGATGGTACGGCGATGCCACAGAACTCCATTAATAAGAGTCCAAGCAAGGAAGTACTCTCTATTTTAGAAACACTTTGTGCAGACCCCTTCTGCTCTTCGTTTGGTTATAGAGAATGCTGGCATCCCCTACTGCCGAAGAGGCCCTGGCAGAACCATATTTTAAAGGCTTGGCCAAGGTGGAGAGTTAAGTCACCTCCCTTGGTCTCTCGTGCAGCTCGTGTGCACCCGTGGTCCCCCATTGCTACTACTACTGCCACTTTCATTTATGGACGATGCAAACATATGAAGATGCATGCAACTGGGGGCCCACCTTGA 1020 0.4716 MRPDMIPMEAEKCENEARTKEETEEAIKQLRKSLMFKATPMPTFYHEGPPPKVELKKLPPSRAKSPKLGRRKSNSGAFNLSKGKKEKGAVTQRKHHALRPTSSQERATTTRQGWDGLLVGGSCGAIRINPWNVEATVEAMNEAISMSDGGKQLRHEKHYRYDNTHDVAYWSRSFLQDMGRACSDLLKKRCWGIGLSFGFRVMALDPNFKKKGRFSIDAMVSAYKKARSRAILLDYDGTAMPQNSINKSPSKEVLSILETLCADPFCSSFGYRECWHPLLPKRPWQNHILKAWPRWRVKSPPLVSRAARVHPWSPIATTTATFIYGRCKHMKMHATGGPP* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00673 339 MobiDBLite consensus disorder prediction 1 21 - -
Rops11g00673 339 MobiDBLite consensus disorder prediction 41 110 - -
Rops11g00673 339 Coils Coil 10 33 - -
Rops11g00673 339 Gene3D Glycogen Phosphorylase B; 116 161 - -
Rops11g00673 339 Pfam Glycosyltransferase family 20 124 178 IPR001830 GO:0003824|GO:0005992
Rops11g00673 339 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 120 182 - -
Rops11g00673 339 Pfam Targeting protein for Xklp2 (TPX2) domain 8 53 IPR027329 -
Rops11g00673 339 PANTHER PROTEIN WVD2-LIKE 3 8 111 IPR044806 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00673 Rops-Chr11 9597339 9598448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00673 124 269 Trehalose Biosynthesis Gene Families AT1G06410 71.918 1.43e-66 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00673 K16055 - gmx:100800847 248.825