Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00639 ATGGAAAAGATCAAAAGCACAGAGCGCATTCTCATCTACCCTTCTCACCCTCCCTTTCTTCATGACCACGCCCTCCCTCTTTCTCCTCTCGACACCGATCGCAACCTTCACCTCACCTTCCGCTACCTCCGCGCTTACGTCGCCACCGCCTCCGCCATTACCTCCGCCCACGATCCCTTCCACGTCATCTATTCCTCCCTCTCCAAAGCCCTCCTTCACTATTACCCACTCGCCGGAACCCTTCGCCACAGCCAGGACCAACACCGCCGCCTCGAAGTCTTCTGCGCTTCCGGACAGGGCGTCCCTCTAATCCGCGCCACCGTTGACTTCACCCTCGATTCGGTCAACTATCTGGACGACCCGGCTTCCGATTTCGTCCAACAGCTTGTACCCGACCCGGGACCCGAAGAGGGGATGGAGCACCCGTGCATGCTTCAGGTGACGGTGTTCGCGTGCGGCGGGTTTACTCTCGGGGCGGCGATGCACCACTCTTTATGCGACGGGCTTGGCGGGACTCTGTTCTTTAACGCGGTGGCTGAGTTGGCTCGCGGGTCGACCAGGATAACGGTGGATCCGGTTTGGGACCGTGAGAGGTTGTTGGGTCCGAGGGACCCGCCCCGAGTGGATTCACCGTTAATAAAGGAGTTTTTGCATTTGGATAAGGGGTTTGTGCCTTACAATGAGGATATTGGTAGGGTTGTGAGAGAGTGCTTTCATGTTAAGGATGAGTTGTTGGACAAGTTCAAGAGATCATTGTTTGAACAATGTGGGTTGAACTTCACCACTTTTGAGGCTCTGGGTGCTTATATTTGGAGGTCCAAGGTCAGGGCCTCAGGAGTGCAGGCTGATGAGAAGGTTAAGTTTGCATACTCAATTAATATAAGGAGACTAGTGAAGCCACCACTACCTGCTGGTTATTGGGGTAATGGTTGTGTTCCAATGTATGTGCAGCTGAGTGCTAAGGATTTGATAGAAAAACCTATTTGGGAAACAGCAGAGCTAATCAAAAAGAGTAAAAGTAATGTTACTGATGAGTATGTTCACTCCTTCATCGATTATCAGGAGCTGCATTTTGCTGATGGGATCATAGCAGGAAAAAGGGTGAGTGGGTTCACAGATTGGAGACACTTGGGGCATTCAACTGTGGACTTTGGGTGGGGAGGCCCAGTTACTGTTTTGCCACTTGGAAGAAACTTACTTGGGAGTGTTGAGCCCTGCTTCTTTTTGCCTTATTCAACAGCCAGTGCAGGGAAGAAGGAGGGGTTCAAGGTTTTGGTGACTTTGGCAGAGGCTGCTTTGCCTGCTTTGAGAGAAGACATGCAAGTGTTTGCCACTAGTCAATAG 1344 0.5171 MEKIKSTERILIYPSHPPFLHDHALPLSPLDTDRNLHLTFRYLRAYVATASAITSAHDPFHVIYSSLSKALLHYYPLAGTLRHSQDQHRRLEVFCASGQGVPLIRATVDFTLDSVNYLDDPASDFVQQLVPDPGPEEGMEHPCMLQVTVFACGGFTLGAAMHHSLCDGLGGTLFFNAVAELARGSTRITVDPVWDRERLLGPRDPPRVDSPLIKEFLHLDKGFVPYNEDIGRVVRECFHVKDELLDKFKRSLFEQCGLNFTTFEALGAYIWRSKVRASGVQADEKVKFAYSINIRRLVKPPLPAGYWGNGCVPMYVQLSAKDLIEKPIWETAELIKKSKSNVTDEYVHSFIDYQELHFADGIIAGKRVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTASAGKKEGFKVLVTLAEAALPALREDMQVFATSQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00639 447 Pfam Transferase family 3 441 - -
Rops11g00639 447 Gene3D - 227 439 IPR023213 -
Rops11g00639 447 Gene3D - 2 215 IPR023213 -
Rops11g00639 447 PANTHER ACYL TRANSFERASE 4 4 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00639 Rops-Chr11 9092698 9095004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00639 40 396 Monolignol Biosynthesis Gene Families AT5G48930 30.214 5.43e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00639 - - gmx:100817021 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00639 11 9092698 9095004 Rops11g00639 11 9092698 9095004 ECH