Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00635 ATGGGTTCAGGTGATTGGTTTAAAACAATAATTAGAGGCAGATCAAAGAAAGCAAAGGGTACCTTAGCACGGGGGAAGCTAAGTGCATTGAAGTCGAACAACTATACCGGGCAAGAGTCTAGTGGTTTAGCAAATGGTATTAAAAATGAGAATCTTGTGTCAGCTGGAGTGTCGGTTGAAACTATTGCTGCAATAAGGATCCAGACTGCATTCCGGGCTTATAAGGCTAGAAAAGCTCTACGTCGCTTGAAAGGCTTCACAAAACTGAAGATCCTAACAGAAGGTTACTCTGTTAAAAACCAAGCCAGTACAGCTATAACATACCTTCATTCATGGAGCAAGATACAGACTGAGATTAGAGCACGCCGAACCTGTATGGTGACAGAAGACAAGATCAGGCGGAAGAAAATAGAGTCTCAACTAAAACTTGAGGCAAAGCTTCATGATGTGGAGGTTGAATGGTCTGGTGGTTCTGACACCATGGAGGAAATCCTTGGAAGGATACATCAGAGAGAAGAAGCAGCAGTTAAGCGAGAAAGAACAATGGCATATGCCTTTTCACATCAGTGGAGGGCCAATGCTAGTCAGAGCCAAGTGCTAGGTAATTATGAACTTGGCAAAGCCAACTGGGGTTGGAGCTGGAAGGCACGTTGGATTGCTGCTCGCCCATGGGAAAGCCGTGTCCACCGCATTACACCTAAAAAAGCTCAAAATAAACAATCAAGCAAGGTTCAGAAGGATAAGAGCACATCAACACCTAAAACCCTAGCTTCAGTCACACCTCCTGCTGCTGATGCAAAAGGGAATACAAAAGCTAGGAGATTGTCTTATCCATCCAGAGAGAAAACTGTGGTTCAGGAAGGAGTGCAGTTATTGCAAAGGCTCTGTGATGTAGAAATTGGTGGTCTGAAGGAGTTATTTAAGATGATTGATGCTGATGACAGTGGAACTATAACATTTGATGAGCTAAAAGAAGGCTTAAAGCAAGTAGGATCTGAACTTATGGAGTCTGAAACAAAGGATCTTATGGATGTGGTAAGATAA 1044 0.431 MGSGDWFKTIIRGRSKKAKGTLARGKLSALKSNNYTGQESSGLANGIKNENLVSAGVSVETIAAIRIQTAFRAYKARKALRRLKGFTKLKILTEGYSVKNQASTAITYLHSWSKIQTEIRARRTCMVTEDKIRRKKIESQLKLEAKLHDVEVEWSGGSDTMEEILGRIHQREEAAVKRERTMAYAFSHQWRANASQSQVLGNYELGKANWGWSWKARWIAARPWESRVHRITPKKAQNKQSSKVQKDKSTSTPKTLASVTPPAADAKGNTKARRLSYPSREKTVVQEGVQLLQRLCDVEIGGLKELFKMIDADDSGTITFDELKEGLKQVGSELMESETKDLMDVVR* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00635 347 ProSiteProfiles IQ motif profile. 60 88 IPR000048 GO:0005515
Rops11g00635 347 MobiDBLite consensus disorder prediction 235 258 - -
Rops11g00635 347 Gene3D - 16 88 - -
Rops11g00635 347 PANTHER IQ-DOMAIN 5-RELATED 1 257 - -
Rops11g00635 347 SMART efh_1 302 330 IPR002048 GO:0005509
Rops11g00635 347 Pfam EF hand 303 329 IPR002048 GO:0005509
Rops11g00635 347 SUPERFAMILY EF-hand 293 345 IPR011992 -
Rops11g00635 347 CDD EFh 303 346 IPR002048 GO:0005509
Rops11g00635 347 Gene3D - 265 347 - -
Rops11g00635 347 ProSiteProfiles EF-hand calcium-binding domain profile. 298 333 IPR002048 GO:0005509
Rops11g00635 347 ProSitePatterns EF-hand calcium-binding domain. 311 323 IPR018247 -
Rops11g00635 347 MobiDBLite consensus disorder prediction 230 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00635 Rops-Chr11 9040330 9055726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00635 1 278 IQD Protein Family AT2G33990 53.214 3.11e-88 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00635 - - gmx:100786185 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00635 11 9040330 9055726 Rops11g00635 11 9040330 9055726 ECH