Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00629 ATGTTTGTACCTTCTTCTGCAGATTCTTCTTCTTCTTTTCTTTTCACTTGTTTGTTCATTTTCTTCACTTTTACTGATACTTCATCATGTTTAGCCAAGCAAGCCAAAACTACCCGCCCTCATAGACAGCTCTCAATTGATTACTATGCCAAATCTTGCCCCCAGGTAGAGCAGTTAGTTGGCTCAGTCACATCTCAACAATTCAATGAATCACCTGTTTCTGGCCTTGCTACCATTCGCCTCCTCTTCCATGATTGTTTTGTAGGAGATTGTGATGCATCAATTTTAATAGCATCAAAGCTTGGAAGCAAGGAGTTGGCAGAGAAGGATGCAGAGGGTAACAAGGATTTGAGGGTGGAGGGGTTTGAGACTATAAGGAAGGCTAAGGCATTGGTGGAGAGCAAGTGCCCAGGAATAGTGTCTTGTGTGGACATTCTTGTAATTGCAGCCAGAGATTATGTACACCTGGTAACTGATTCATACTTTGTCCTCTACTCATAG 501 0.4232 MFVPSSADSSSSFLFTCLFIFFTFTDTSSCLAKQAKTTRPHRQLSIDYYAKSCPQVEQLVGSVTSQQFNESPVSGLATIRLLFHDCFVGDCDASILIASKLGSKELAEKDAEGNKDLRVEGFETIRKAKALVESKCPGIVSCVDILVIAARDYVHLVTDSYFVLYS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00629 166 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 SUPERFAMILY Heme-dependent peroxidases 43 157 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 ProSiteProfiles Plant heme peroxidase family profile. 43 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 Gene3D - 44 165 - -
Rops11g00629 166 Pfam Peroxidase 64 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 PANTHER - 34 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00629 166 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00629 Rops-Chr11 8978639 8979528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00629 20 162 Peroxidase AT2G34060 60.000 5.73e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00629 K00430 - gmx:100777463 224.557