Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00628 ATGATCAAACTCTTCAATTCCAAAGGCTTAACCATAAAGGACATGGTTGCACTCTCGAGTGCCCACACAATTGGGTTTTCTCATTGCAAGCACTTTCTGACCTGGCTGTACAATTACCATGACAGGGGTCAACCCGACCCGGATATGAACTTGGGACTCATGCACGCACTGAGAATGTATTACCCACAATATGGTGGAAACTCAGATGTTGTGGTCCCATTTGATGTCACCACCCCATTCTCATTTGACAATGCTTATTATGGGAACTTGGAGAAGAAGTTGGGTTTGCTAGCCTCTGACCAGGCCCTATTTTTGGACCCACGAATTAAGCCTTTGGTTTAA 342 0.4503 MIKLFNSKGLTIKDMVALSSAHTIGFSHCKHFLTWLYNYHDRGQPDPDMNLGLMHALRMYYPQYGGNSDVVVPFDVTTPFSFDNAYYGNLEKKLGLLASDQALFLDPRIKPLV* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00628 113 FunFam Peroxidase 1 113 - -
Rops11g00628 113 PRINTS Plant peroxidase signature 73 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00628 113 PRINTS Plant peroxidase signature 13 25 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00628 113 PRINTS Plant peroxidase signature 89 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00628 113 Pfam Peroxidase 1 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00628 113 PRINTS Haem peroxidase superfamily signature 75 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00628 113 PRINTS Haem peroxidase superfamily signature 14 29 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00628 113 PANTHER - 1 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00628 113 ProSiteProfiles Plant heme peroxidase family profile. 1 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00628 113 Gene3D Peroxidase, domain 2 1 113 - -
Rops11g00628 113 ProSitePatterns Peroxidases proximal heme-ligand signature. 14 24 IPR019793 -
Rops11g00628 113 SUPERFAMILY Heme-dependent peroxidases 2 112 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00628 Rops-Chr11 8976965 8977306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00628 1 112 Peroxidase AT2G34060 57.143 1.60e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00628 K00430 - pop:18103107 172.555