Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00626 ATGCATTTACCTTCAACTATTCCTCAAGCACTTGCAAGAATTTGGCTATTCTTTTATTTACTCATCTCCTTCGTTCTCATTAATGGTAACCAAGATGAGGCTATGACTGCAGACAACAAAGTTATATCTATTGGGGCGCTAATTGATCTTAATTCCCGTATTGGAAAAGAACAGCAAGCAGCCATGGACATTGCAGCCCGAAGTTACAACAGCACTTCAAAGAAATACAAGTTGGCTCTCCATTTTTGGAACTCAACCAAGGATCCCCTCAGAGCCACCACACTTGCTGAAGAGATGATTAACAAGCAAAAGGTGCAAGTGATTATAGGGATGCAAACATGGCCAGAAGCAGCTCTAGTGGCTGAGAAAGGAAGCCAAGCTCAAGTTCCCACGATATCCTTTGCAGAACCTACCATTACCCCACCATTGATGACAGTTCGATGGCCTTTTTTGGTGAGAATGGCTAACAATGGTACAGCACATATAAAATGCATTGCAGCTATAGTGCAAGCTTTTAGCTGGCAAAGAGTAGTAGCCATCTATGAAGATGATGGGTATGGTGGAGATTATGGAATGTTAGCACTGCTATCTGAGGCCCTCCAGGAAGTAGGTTCAATGATTGAGTACCGCTTAGCTCTTCCACCAATTTCTTCTCTACATGATCCAGGAGAGCTAGTACGTGAAGAGCTGCATAAGTTAAAGCAAACACAATCTCGGGTGTTCATTGTGCTGAAGTCATCATTAGAAATGGCGATTCATTTGTTCAAAGAAGCTTCAAAAATGGGACTTGTGGATAGAGAATCAGCTTGGATAATCCCAGAGAGCATAACTAACTTGCTGGACTCTGTCAATAAGTCTGCTATTTCCTATATGGAAGGAGCTTTAGGAATCAAGACCTACTACCCCGAAAGAAGCATTGAGTATCAAGATTTCGAGGCTCAGTTCCGGAGAACTTTTTGGTCAAAGAATCCTGAGGAAGATAACCGCTACCCAGGATTTTATGCTCTTCAAGCATATGATAGCATCAAAATTGTCACTCAAGCAGTCAACAGAATGGCCAGTAGAAACAATAGCAGCCCAAAGACTTTACTAAGAGAAATACTGTCTAGCAATTTCATTGGTTTAAGTGGCCAAATTCAATTTAAAGCTGGGCAACTCTTGCAGAATCCTAACTTAAGTATAGTAAATGTGGTTGGGAGGAGTTACAAGGAATTATGCTTTTGGACTCAACAACATGGGTTCACCACAAGCCTCCTTATAGGACAAGGTGGAAATACAAAATGTTTCAAGGGTGTACATTGGCCTGGGAATTTGCAAAGGGATCCAAAGGGATGGAATATGCCCACTAAACAAAATCCATTGAAAATTGCAGTCCGAAGCAGAACCTCATTTTCCAAGTTTGTCCATGTTGAGTATGGTCAGGATCGAAGTCCTGTAAGTTATAGTGGATTCTGCATTGAAATTTTTGAGCATGTGCTTGGACTTTTGGGGTATGATCTGCCGTATCACTATTATCCCATCAATGGAACCTATAATGATTTGGTTCAGCTTGTCTATAACAAGACTTATGATGCTGTTGTTGGGGACATGACCATACTAGAGGAAAGATTGCAGTATGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCAGAAAAGTCTGAGGAGTCAGCATGGATGTTTATGAAGCCCTTTACCTGGGAGTTGTGGATGGTTACAGGTGCAATCTTGATTTACACAATGTTAGTAGTTTGGTACCTTGAGAGAGAACCCAATCCAGAGTTTCATGGCAATTGGAAGAGCCAGATCAGCACAGCTCTTTGGTTTACCTTCTCTTCACTGTTCTTCGCTCATAGGGAAAAAATGCATAGCAACTTAACTAGAGTGGTGATGGTCTCATGGCTCTTTCTGGTTTTGATTCTTAGCTCAAGCTATACTGCCAGTCTTTCTTCAATGCTCACAGTTAAAAAACTGCGACCAAATGTAACAGACATTCAGTGGCTGAAGAGGAACAACATGAAAATTGGTTGTGATGGTGACTCATTTGTTAGATCGTTCCTAGAGAGAGTAGAAAAATTCGAGCCGGAGAACATCATAAACATTACTGATGAATACAAGTATGATAACGCATTTGCAAATAACAGTATAGCAGCTGCCTTTCTTGAGCTCCCATATGAAAAAGTATTCATCAGTGAATACTGCAAGAAGTACACTGGCTCCACCCCCAGAACTAGATTTGGAGGATTGGGCTTTATGTTCCAGAAAGGCTCGCCAGTGGCTAGAGACGTTTCTAAAGCTATATTACATCTCTCAGAAAATGCAGAGCTTAAGAGATTGGAGGAAAAATGGTTGATGACCTCAAAGGATTGCTCCAACAATAAGACCTCCACCTCCAACGATATGGAAAGTTTGAAGCTTGGAAGCTTATGGGTTCTATATGTCATCTCTGTTGCCACTTCCACCATTTGCCTGCTACTATCAATCATCCAGCGTCTAAAACCAAGTCAGCAACGTGAACAAGTGCCACCAGAAGAAGGCAATGGCACCCCAAGTGATGAAAGGGTGTGGACAAAGGTGATTACATTTGCAAAACAGATTCATAGCAAAAAGGAAATGGCTTCACCAGTACCTGGAATCTTAATGCTGTCTTCTCCACCACCACCAGAGGGTTGTGATGCATCAATTTTAATAGCATCAAAGCCTGGAAGCAAGGAGTTGGCAGAGAAGGATGCAGAGGTTAACAAGGATTTGAGGGTGGAGGGATTTGAGACTATAAGGAAGGCTAAGGCATTGGTGGAGAGCAAGTGCCCAGGAACAGTGTCCTGTGTGGACATTCTTGTAATTGCAGCCAGAGATTATGTACACCTGGCAGGTGGGCCCTATTACCAAGTGAAAAAGGGAAGATGGGATGGAAAGATATCAACGGCATCAAGGGTGGGACACCACATCCCCCGTGCAAACTCCACCGTTGATCACATGATCAAACTCTTCAATTCCAAAGGCTTAACCATAAAGGACATGGTTGCACTCTCAGGTGCCCACACAATTGGGTTTTCTCATTGCAAGCACTTTCTGACTCGGCTGTACAATTACCATGACAGGGGTCAACCCGACCCGGATATGAACCCGAGACTCATGCACGCACTGAGAATGTATTGCCCACGATATGGTGGAAACTCAGATATTTTGGTCCCATTTGATGTCACCACCCCATTCTCATTTGACAATGCTTATTATGGGAACTTGGAGAAGAAGTTGGGTTTGCTAGCCTCTGACCAGGCCCTGTTTTTGGACCCACGAACCAAGCCTCTGGTTCAAGCTCTGTCAAAGGATAAGCATAAATTTTTTCAAGCTTTTGCAGCTGCAATGGACAAATTGAGTTCGATAAGAGTGATAAGAGGGAGGAAGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTGA 3462 0.4269 MHLPSTIPQALARIWLFFYLLISFVLINGNQDEAMTADNKVISIGALIDLNSRIGKEQQAAMDIAARSYNSTSKKYKLALHFWNSTKDPLRATTLAEEMINKQKVQVIIGMQTWPEAALVAEKGSQAQVPTISFAEPTITPPLMTVRWPFLVRMANNGTAHIKCIAAIVQAFSWQRVVAIYEDDGYGGDYGMLALLSEALQEVGSMIEYRLALPPISSLHDPGELVREELHKLKQTQSRVFIVLKSSLEMAIHLFKEASKMGLVDRESAWIIPESITNLLDSVNKSAISYMEGALGIKTYYPERSIEYQDFEAQFRRTFWSKNPEEDNRYPGFYALQAYDSIKIVTQAVNRMASRNNSSPKTLLREILSSNFIGLSGQIQFKAGQLLQNPNLSIVNVVGRSYKELCFWTQQHGFTTSLLIGQGGNTKCFKGVHWPGNLQRDPKGWNMPTKQNPLKIAVRSRTSFSKFVHVEYGQDRSPVSYSGFCIEIFEHVLGLLGYDLPYHYYPINGTYNDLVQLVYNKTYDAVVGDMTILEERLQYVDFTVPYAESGLSMIVPEKSEESAWMFMKPFTWELWMVTGAILIYTMLVVWYLEREPNPEFHGNWKSQISTALWFTFSSLFFAHREKMHSNLTRVVMVSWLFLVLILSSSYTASLSSMLTVKKLRPNVTDIQWLKRNNMKIGCDGDSFVRSFLERVEKFEPENIINITDEYKYDNAFANNSIAAAFLELPYEKVFISEYCKKYTGSTPRTRFGGLGFMFQKGSPVARDVSKAILHLSENAELKRLEEKWLMTSKDCSNNKTSTSNDMESLKLGSLWVLYVISVATSTICLLLSIIQRLKPSQQREQVPPEEGNGTPSDERVWTKVITFAKQIHSKKEMASPVPGILMLSSPPPPEGCDASILIASKPGSKELAEKDAEVNKDLRVEGFETIRKAKALVESKCPGTVSCVDILVIAARDYVHLAGGPYYQVKKGRWDGKISTASRVGHHIPRANSTVDHMIKLFNSKGLTIKDMVALSGAHTIGFSHCKHFLTRLYNYHDRGQPDPDMNPRLMHALRMYCPRYGGNSDILVPFDVTTPFSFDNAYYGNLEKKLGLLASDQALFLDPRTKPLVQALSKDKHKFFQAFAAAMDKLSSIRVIRGRKHGEKRRDCSMHM* 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00626 1153 CDD secretory_peroxidase 893 1150 IPR033905 GO:0004601|GO:0042744
Rops11g00626 1153 Gene3D - 563 701 - -
Rops11g00626 1153 FunFam Peroxidase 989 1131 - -
Rops11g00626 1153 Pfam Receptor family ligand binding region 59 398 IPR001828 -
Rops11g00626 1153 Pfam Ligand-gated ion channel 790 822 IPR001320 GO:0015276|GO:0016020
Rops11g00626 1153 Gene3D - 894 1151 - -
Rops11g00626 1153 CDD GluR_Plant 452 789 - -
Rops11g00626 1153 Gene3D - 457 562 - -
Rops11g00626 1153 Gene3D Peroxidase, domain 2 989 1131 - -
Rops11g00626 1153 SUPERFAMILY Heme-dependent peroxidases 894 1151 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 836 IPR015683 -
Rops11g00626 1153 SUPERFAMILY Periplasmic binding protein-like II 432 790 - -
Rops11g00626 1153 PRINTS Plant peroxidase signature 1086 1103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Plant peroxidase signature 944 954 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Plant peroxidase signature 925 938 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Plant peroxidase signature 1070 1085 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Plant peroxidase signature 1126 1139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Plant peroxidase signature 1010 1022 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Plant peroxidase signature 963 978 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 Pfam Bacterial extracellular solute-binding proteins, family 3 480 789 IPR001638 -
Rops11g00626 1153 Gene3D - 164 331 - -
Rops11g00626 1153 Gene3D - 36 163 - -
Rops11g00626 1153 Gene3D - 712 796 - -
Rops11g00626 1153 FunFam Glutamate receptor 161 329 - -
Rops11g00626 1153 CDD PBP1_GABAb_receptor_plant 43 418 IPR044440 -
Rops11g00626 1153 ProSitePatterns Peroxidases proximal heme-ligand signature. 1011 1021 IPR019793 -
Rops11g00626 1153 FunFam Glutamate receptor 453 564 - -
Rops11g00626 1153 ProSiteProfiles Plant heme peroxidase family profile. 894 1153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 Gene3D - 338 456 - -
Rops11g00626 1153 SMART GluR_14 453 791 IPR001320 GO:0015276|GO:0016020
Rops11g00626 1153 FunFam Glutamate receptor 563 693 - -
Rops11g00626 1153 SUPERFAMILY Periplasmic binding protein-like I 39 445 IPR028082 -
Rops11g00626 1153 PRINTS Haem peroxidase superfamily signature 1011 1026 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Haem peroxidase superfamily signature 945 962 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Haem peroxidase superfamily signature 963 975 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 PRINTS Haem peroxidase superfamily signature 1072 1087 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g00626 1153 Pfam Peroxidase 894 1115 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00626 Rops-Chr11 8925703 8939308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00626 8 837 Ion Channels AT2G29120 32.601 3.07e-146 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00626 - - gmx:100818619 1395.18