Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00617 ATGGACCAAAAACATAAAGTGTTTCTTCTGCCGCTGCTTCTTTTCCATGTTCTGCTTGTTCCATCACAGTCACAGACAGACGATCGAGACTTTTCTGCCCTTACATCTCTCATACAATCCTGGAAGATCAGACCACAAAATTGGGTGGGTACGGATCCTTGTGGCAGTAATTGGGAGGGAATTCGTTGTGCCAATTCAAGGATTGCTGAATTGACACTAGGAGGCTTGACATTGCAGGGCCAGCTGTCTTCAGCAATACAGTCTTTATCAGAACTAAGGACTCTGGATCTTTCTTACACGGGCTTGACAGGAACAATTCCAAAAGAAATTGGGAATCTGAAGAAGCTACAATCCCTAGCATTGGTCGGTTGTGGTTTATCTGGTCCTCTTCCAGATTCAATAGGAGCTTTAAAGCAGCTTACCTTTTTAGCATTGAATAAGAATCGATTCACTGGAAATATTCCACTGTCTCTGGGCAATCTATCCAATATTGATTGGCTAGATCTTGCTGATAACCAGCTTGAAGGGCCTATTCCTGTCTCTGATGACCAAGGACGACCAGGTCTTGACCTGCTCCTTAAGGCACAGCACTTTCATATGGGGAACAATAAGTTATCTGGTCCAATACCAGAAAAACTGTTCAACTCCAGTATGATTCTAGAACATGTGCTTTTTGACAGCAATCAACTAACGGGTAGTATTCCTAAAACCATTACTTCTGTGAAAACATTGGAGGTGGTGCGCTTTGATAGGAATAACTTAACTGGGGGAGTGCCTTCAGACTTGAACAGTCTCGGGAAACTTAGCGAGTTCTATTTATCTCACAATGACCTGAATGGCTCTTTGCCGGATCTTACTGGAATGAATAGTCTCACCTATGTGGATCTGAGCTACAATCATTTCAATAATTCTGATATTCCTTCATGGGTTTCAAATCTGCCAGCTCTGACATCAGTGATACTGAAGGAGAACGACCTGAGTGGCACATTAAATCTTACCGATGGCTACAGCAGCAGTCTGCAACTCATTGATTTGGAGAATAATGATATGACCGACCTCAAGCCGATAAACCAAAATTTTAATTTTGACTTGAGACTGGCTAACAACAAACTTTGTCTTGAAAATGATGCTTCCCAAAGGAGTTACTGCAAAGAGCACCAAACCATTCCCTCATATGAAACACCAACAAATAATTGTTCACCACTATCTTGCGGTGACAATCAAATTTCCAGCCCCAACTGCAAATGTGCATTTCCCTATAGTGGACTTCTGTCATCAAGAGCTTTTAGTTTCTCAAACTATAGTAACACAAGTTACTATAAGGAACTTGAGCAGACTCTGATGGATACTTTTAGAAAACAAAATATTGCAGTAGATTCAGTTTCTCTCAGTAAGCCCATCAGGAATACATCTAATGATAATTTTGACTTGACTCTGGATGTCTTCCCAGCTCAAACTGATCGTTTCAATGCAACTGGAGTTTTAACTATTGCTTTTGTGCTTAGCAACCAAATTTACAAACCCCCAGATTTTTTCTCCCCTTACTTCTTCAACGGTGCTAATTATGAATACTACGCAGGAGAACCTAAAGGATCAAAGTCAAAAAATACAGGGGTTATAGTTGGTGCAGTAGTTGCTGTAGTGGTCTTTCTTGTACTAGCACTCCTTGTAGGGATATATGCCATCCGCCAAAAAAGAAGAGCAAAAAGATCTGCAGAGTCGAACCCTTTTGTAAATTGGGAACAGAACAAGAATAGTGGCACTGCTCCTCAGTTGAAAGGAGCACGATGGTTTTCTTTTGAAGAGCTAAGGAAATACAGCAACAACTTCTCAGAAGCCAATACTATTGGATCTGGGGGCTATGGAAAGGTTTACCAAGGTGTTCTTCCTGCTGGGGAGTTGGTTGCAATCAAACGGGCAGCACAAGAATCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATAGAACTTCTATCAAGGGTCCATCATAAGAATCTCGTTAGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGTATATTCCAAATGGCAATTTAATGGATAGTCTTTCAGGGAAGTCTGGAATATGGATGGATTGGATACGGAGACTGAAAGTAGCATTGGGTGCTGCCAGGGGTCTGACCTATCTACATGAACTTGCTAACCCACCAATCATACACAGGGACATAAAATCAAGCAATATCCTACTTGATGATCACCTCAATGCAAAAGTTGCTGATTTTGGCCTCTCCAAACTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGGTACTTGGATCCTGAATATTACATGACTCAGCAGTTGACTGAAAAGAGTGATGTATATAGCTTTGGAGTGCTAATGTTGGAACTAGTAACAGCAAGAAGGCCAATAGAACAAGGAAAGTATATTGTAAGAGAGGTAATGAGGGTAATGGATACATCAAAAGATTTATACAACCTTCATTCCATTCTAGATCCAACTATAATCAAAGCGACAAGACCAAAAGGTTTAGAAAGGTTTGTGGGACTGGCAATGAGGTGTGTCAAAGAATATGCAGCTGAGAGGCCTACAATGGCTGAGGTTGTAAAAGAGATTGAGAATATAATCGAGCTTGCTGGAGTGAACCCAAATGCTGAATCAGCTTCAACATCAGAAACTTATGAGGAAACAAGGGGGGATGTCAAACATCCTTATGTCAATGATGATTTTGACTATAGTGGAATTTTTCCAACATCAAAGGTAGAACCTCAATGA 2796 0.4102 MDQKHKVFLLPLLLFHVLLVPSQSQTDDRDFSALTSLIQSWKIRPQNWVGTDPCGSNWEGIRCANSRIAELTLGGLTLQGQLSSAIQSLSELRTLDLSYTGLTGTIPKEIGNLKKLQSLALVGCGLSGPLPDSIGALKQLTFLALNKNRFTGNIPLSLGNLSNIDWLDLADNQLEGPIPVSDDQGRPGLDLLLKAQHFHMGNNKLSGPIPEKLFNSSMILEHVLFDSNQLTGSIPKTITSVKTLEVVRFDRNNLTGGVPSDLNSLGKLSEFYLSHNDLNGSLPDLTGMNSLTYVDLSYNHFNNSDIPSWVSNLPALTSVILKENDLSGTLNLTDGYSSSLQLIDLENNDMTDLKPINQNFNFDLRLANNKLCLENDASQRSYCKEHQTIPSYETPTNNCSPLSCGDNQISSPNCKCAFPYSGLLSSRAFSFSNYSNTSYYKELEQTLMDTFRKQNIAVDSVSLSKPIRNTSNDNFDLTLDVFPAQTDRFNATGVLTIAFVLSNQIYKPPDFFSPYFFNGANYEYYAGEPKGSKSKNTGVIVGAVVAVVVFLVLALLVGIYAIRQKRRAKRSAESNPFVNWEQNKNSGTAPQLKGARWFSFEELRKYSNNFSEANTIGSGGYGKVYQGVLPAGELVAIKRAAQESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGNLMDSLSGKSGIWMDWIRRLKVALGAARGLTYLHELANPPIIHRDIKSSNILLDDHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTIIKATRPKGLERFVGLAMRCVKEYAAERPTMAEVVKEIENIIELAGVNPNAESASTSETYEETRGDVKHPYVNDDFDYSGIFPTSKVEPQ* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00617 931 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Rops11g00617 931 Pfam Protein kinase domain 611 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00617 931 CDD STKc_IRAK 616 882 - -
Rops11g00617 931 Gene3D Phosphorylase Kinase; domain 1 580 685 - -
Rops11g00617 931 PANTHER RECEPTOR-LIKE PROTEIN 55 40 882 - -
Rops11g00617 931 Gene3D Ribonuclease Inhibitor 186 472 IPR032675 -
Rops11g00617 931 SUPERFAMILY Protein kinase-like (PK-like) 589 878 IPR011009 -
Rops11g00617 931 ProSiteProfiles Protein kinase domain profile. 610 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00617 931 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 686 895 - -
Rops11g00617 931 Gene3D Transferase(Phosphotransferase) domain 1 686 903 - -
Rops11g00617 931 FunFam Leucine-rich repeat protein kinase family protein 576 685 - -
Rops11g00617 931 FunFam Leucine-rich repeat family protein 29 183 - -
Rops11g00617 931 SUPERFAMILY L domain-like 33 371 - -
Rops11g00617 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Rops11g00617 931 FunFam Leucine-rich repeat protein kinase family protein 185 284 - -
Rops11g00617 931 SMART serkin_6 610 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00617 931 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00617 Rops-Chr11 8811918 8819297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00617 10 931 Receptor kinase-like Gene Family AT5G49760 53.003 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g00617 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00617 - - gmx:100786172 1444.48