Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00614 ATGAAGAAGATTTCAAAAACCGGCTACAAGTCAGCATCACACAGACTCTTTAAGGACAAGGCGAAGAACCATGTTGATGATCTGCAGGTGATGTTCCTGAATCTGCAGTTTGCAAGGAAGGAGAGCCGGACAGTTGATGCTGCACTTCTTGAGGAGCAACTCCATCAGATGCTTCGAGAGTGGAAGGCTGAGCTCAATGAGCCCTCTCCTGCTTCTTCTTTGCAGCAAGGTGGAAGTCTTGGATCATTCTCGACCGATATCTGTAGGTTATTGCAGCTTTGTGAGGAGGAAGATGATGCCACTAGTCCAATCATTGCACCTAAGCCTGAACCTAATGATCAGACTCTGCTGTCCGGTGATAAGGGCCAACATCAACATGATTTCCTATTAACTGATGAGTGCAAATACTCCACCCTAGGAGTTCCAAATATGGCAGATAACAATGCAGATGGGCCTGCTTTAGAGTATCATCAATTTAATTTGAATGAGGACTTCAATCACAGCTTTTATGCTGGTTTTAATGGTACAGGTTTTTATGAGGAGGATGTCGTTCCTCATATATCTAGCTGTCTACCCAGTCTCCTCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGTGCAAGGATTGGACTGGTGTCAAGATTATTGCAGTAGTTTTCATGCTGCTCTAGCTTTAAACGAAGGACCTCCAAGCATGGCCCCAATTCTACGACCTGGTGGAATTGGACTGAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGGTGGCATCCCAGAATGTGAAGGAGCAGCAACTGCAAAGTCTCCGTGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATAAGGGAGTGGCTTTTCTTCGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTATAGTGGGCGTGGATGGCATGAATCTAGAAAGCAAGTAATAAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGATCCGCAACCACTAAACCATTTTGAGTGGCACCTCTTTGAGTATGAAATTAGCAAGTGTGATGCATGTGCCTTATATCGGTTGGAACTAAAGCTTGTTGATGGGAAGAAGAGCTCTAAGGTAAAGATATCAAGTGATTCAGTTGTTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCTGAGTTTCCTTATGATAACAAACGGTCTGCCAAAGGCAGAGCTAAACTTAATGCCAAGGTTGGCATAGGTGGTGTCTATTCAGCTTCAAATAGAGTGACTCCACTAAATGGACCATATGAATACGGGGTAGCTGCACCATTTGACTATCTTGTTGAGAACACTAGCGACTACTATGTGCCTTGA 1419 0.4454 MKKISKTGYKSASHRLFKDKAKNHVDDLQVMFLNLQFARKESRTVDAALLEEQLHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSPIIAPKPEPNDQTLLSGDKGQHQHDFLLTDECKYSTLGVPNMADNNADGPALEYHQFNLNEDFNHSFYAGFNGTGFYEEDVVPHISSCLPSLLPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPSMAPILRPGGIGLKDNLLFAALSAKAQGKDGGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLFEYEISKCDACALYRLELKLVDGKKSSKVKISSDSVVDLQKQMGRLSAEFPYDNKRSAKGRAKLNAKVGIGGVYSASNRVTPLNGPYEYGVAAPFDYLVENTSDYYVP* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00614 472 PANTHER TRANSCRIPTION FACTOR VOZ1 1 467 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00614 Rops-Chr11 8757858 8761132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00614 3 472 VOZ-9 Transcription Factor Family AT1G28520 69.168 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Rops11g00614 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00614 - - gmx:100798565 813.527