Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00612 ATGGACATCAACCAAGGGCATGGAGCTGCAGAGTTGTTTCAGGCCCAGTCACACTTGTATAAATATACGTATGGTTTCATTGGTTCCATGTGCCTCAAAAGTGCAGTTCACTTGGGAATACCAGACATAATCTACAACCATGGACAACCCATTACCATCCCTGAGTTGGTCTTGGCTCTTCATATTGACCCTGCTAAATCTGATTGTGTATATAGGCTCATACGCTTGCTAGTGCATGCTGGCTTCTTTGCTAAAACCAAGGTTGTAAAACATGATGAGAAAGAAGAAGAGGGTTATGATCTCACACCTTCCTCTAGTCTGCTCCTCAAGGACACCATCCCAACCTTGTCTCCTTTTGTCCGGGCAATGTTTCATCCTGCTTTAGTTCACTCATCTGAATTCTTGGGAGAATGGTTTCACAGAAATGAGCTCACACCCTTTCACTCTGCATTTGACATGGGCTATTGGGACTATTTAGGCCAAAACCAAGAGTTTAACAAGCTCTTCAATGAAGCAATGATTAGTGATTCCGGGATGATGAATTTGGTAATCAAAAACTGCAAATATGTTTTTGAGGGGTTGAATTCATTGGTTGATGTTGGAGGTGGTCAGGGAGCCGTAGCCAGGATAGTTTCCGAGTCATTGCCTAATTTGCAAGTCACTGTGCTTGATCTTCCACATGTGGTTGAAAATTTGGTTGATAGCAGCAACAATTTGAAATTTGTTGGAGGTGACATGTTTGAGTGTATTCCTTCAGCAGATGCCATTCTTCTTAAGTTAGTGTTGCATGCTTATAGTGATGAAGAGTGCATTAAGGTACTAAAGAAGTGCAGAGAAGCTATTTCAAGCCGGGGCAAGGAAGGAAAAGTAATTATCATAGACATAGTGATCCGTGACAACAATGATGAGTATGAATTGACTGAAGCAAAGCTCTATTTTGATGTGTTAATGATGGTTTTGGTCACTGGAAAAGAGAGAGAAGAAAAAGAATGGAAGAAGCTGTTCTTGGAAGCTGGATTCAGTCACTATAAGATAACACCCATGTTTGGCATGAGGTCCCTTATCGAAGTTTATCCATGA 1080 0.4139 MDINQGHGAAELFQAQSHLYKYTYGFIGSMCLKSAVHLGIPDIIYNHGQPITIPELVLALHIDPAKSDCVYRLIRLLVHAGFFAKTKVVKHDEKEEEGYDLTPSSSLLLKDTIPTLSPFVRAMFHPALVHSSEFLGEWFHRNELTPFHSAFDMGYWDYLGQNQEFNKLFNEAMISDSGMMNLVIKNCKYVFEGLNSLVDVGGGQGAVARIVSESLPNLQVTVLDLPHVVENLVDSSNNLKFVGGDMFECIPSADAILLKLVLHAYSDEECIKVLKKCREAISSRGKEGKVIIIDIVIRDNNDEYELTEAKLYFDVLMMVLVTGKEREEKEWKKLFLEAGFSHYKITPMFGMRSLIEVYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00612 359 Gene3D - 2 108 IPR036388 -
Rops11g00612 359 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Rops11g00612 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Rops11g00612 359 Gene3D Vaccinia Virus protein VP39 110 359 IPR029063 -
Rops11g00612 359 FunFam O-methyltransferase ZRP4 110 359 - -
Rops11g00612 359 FunFam Coniferyl alcohol 9-O-methyltransferase 2 108 - -
Rops11g00612 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 359 IPR016461 GO:0008168
Rops11g00612 359 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Rops11g00612 359 PANTHER O-METHYLTRANSFERASE 11 344 IPR016461 GO:0008168
Rops11g00612 359 Pfam O-methyltransferase domain 138 341 IPR001077 GO:0008171
Rops11g00612 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00612 Rops-Chr11 8741360 8746422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00612 30 357 Monolignol Biosynthesis Gene Families AT5G54160 32.845 4.53e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00612 K22588 - qsu:112018723 471.47