Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00611 ATGGACATCAACCAAGGGCATGGAGCTGCAGAGTTGTTTCAGGCCCAGGCACACTTGTATAAATATACGTATGGTTTCATTGGTTCCATGTGCCTCAAAAGTGCAGTTCACTTGGGAATACCAGACATAATCTCCAACCATGGACAACCCATTACCATCCCTGAGTTGGTCTTGGCTCTTGCTATCGACCCTGCTAAATCTGGTTATGTATATAGGCTCATGCGCTTGCTGGTTCATGCTGGCTTCTTTGCTAAAACCAAGGTTGTAAAACATGATGAGAAAGAAGAAGAGGGTTATGATCTCACACCTTCCTCTAGGCTGCTCCTCAAGGACAACATCCCAACCTTGTCTCCTTTTGTCTGGGCAATGTTTCATCCTGCTTTAGTTCACTCATCTGAATTCTTGGGAGAATGGTTTCACAGAAATGAGCTCACACCCTTTCACACTGCATTTGGCATGGGCTATTGGGACTATTTAGGCCAAAACCAAGAGTTTAACAAGCTCTTCAATGATGCAATGGTTAGTGACTCCGGGATGATGAATTTGGTGATCAAAGACTGCAAATCTGTCTTTGAGGGACTGAATTCATTGGTTGATGTTGGGGGTGGTCAGGGAGCTGTGGCTAGGATAGTTTCTGAATCACTTCCTAATTTGCAAATCACGGTGCTTGATCTTCCTCATGTGGTTGAAAATTTGGCTAATGGTAGGAATATAAAATTTGTTGGAGGTGACATGTTTGAGTGTATCCCTTCAGCAGATGCCATTCTTCTTAAGATAGTCTTGCATGCTTATAGTGATGAAGAGTGCATTAAGGTATTGAAGAAGTGCAGAGAAGCTATTTCAGGCGAGGGAAAGGAAGGAAAAGTAATTATAATAGACATAGTGATCGGTGAGCAGAATGATAACCACGAATTGACAGAAGCAAAGCTCTTTTATGATGTGTTAATGATGGCCGTGGTCACTGGAAAAGAGAGAGAAGAAAAAGAATGGAAGAAGCTGTTCTTGGAAGCTGGATTCAGTCACTACAAGATAACACCCATCTTTGGAATGAGGTCGCTTATTGAAGTTTATCCTTGA 1077 0.4243 MDINQGHGAAELFQAQAHLYKYTYGFIGSMCLKSAVHLGIPDIISNHGQPITIPELVLALAIDPAKSGYVYRLMRLLVHAGFFAKTKVVKHDEKEEEGYDLTPSSRLLLKDNIPTLSPFVWAMFHPALVHSSEFLGEWFHRNELTPFHTAFGMGYWDYLGQNQEFNKLFNDAMVSDSGMMNLVIKDCKSVFEGLNSLVDVGGGQGAVARIVSESLPNLQITVLDLPHVVENLANGRNIKFVGGDMFECIPSADAILLKIVLHAYSDEECIKVLKKCREAISGEGKEGKVIIIDIVIGEQNDNHELTEAKLFYDVLMMAVVTGKEREEKEWKKLFLEAGFSHYKITPIFGMRSLIEVYP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00611 358 Pfam O-methyltransferase domain 138 340 IPR001077 GO:0008171
Rops11g00611 358 FunFam Coniferyl alcohol 9-O-methyltransferase 2 108 - -
Rops11g00611 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 358 IPR016461 GO:0008168
Rops11g00611 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Rops11g00611 358 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Rops11g00611 358 FunFam O-methyltransferase ZRP4 110 358 - -
Rops11g00611 358 PANTHER O-METHYLTRANSFERASE 11 343 IPR016461 GO:0008168
Rops11g00611 358 Gene3D Vaccinia Virus protein VP39 110 358 IPR029063 -
Rops11g00611 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Rops11g00611 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Rops11g00611 358 Gene3D - 2 108 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00611 Rops-Chr11 8740541 8741788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00611 30 356 Monolignol Biosynthesis Gene Families AT5G54160 33.433 6.07e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00611 K22588 - qsu:112018723 501.901