Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00607 ATGACATGGTGCAATAACTCTGATGAGGAGAGGGGCAATGAATTAATCACGCCCACTATTACTCCTAGAGCTAACAACACTGACATAAAATGTCCCTCATGCGGCCATAATATTGAAGTCAAAGATCAGGGTGGAATTCATGGCTTGCCGGGGTTACCAGCTGGAGTGAAATTTGATCCTAATGACCTTGAAGTACTAGAGCATTTGGAGGCCAAAATGGGGTCTGATTTGTGCAAGCTTCATCCCCTTATTGATGAGTTCATACCAACACTTGAAGGCGAGAATGGAATATGTTATACACACCCAGAAAAGCTACCAGGAGTCAGCAAAGATGGACAAATCCGCCACTTCTTTCATAGGCCTTCGAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGAAGAAGGAGATGAAACAAGATGGCACAAAACGGGGAAAACTAGACCAGTTTTTGCTGGTGGTGTAGTGAAGGGTTTCAAAAAGATACTAGTACTCTACACCAACTATGGCAGGCAAAAGAAGCCTGAGAAGACTTATTGGGTGATGCATCAATACCATCTTGGTAGTAATGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTACCAGACACAACCTAGACAAAGTGGTAATTCCATTATAAGTGATCATCCATATGAAAAAATAAAAAGAAGTGACCATAACAGTACAATGCCCAAAAATGCACCTCTTGTGGATTGCTACAGTGCTCCTTACATAAATTATGAACATGTCCATGTGAGTCATAATATTGGAGAAAGCTCCCCTCAATTTATTCCAAACTTGGTTGTCCAAGGTGATGGCTCTTATTCTTTTAGCAATGAATGCAAACAAAGAAAGACTGAAGAGAAAGTAACACTGGGAAGAGCTTCTTGGTAG 921 0.4072 MTWCNNSDEERGNELITPTITPRANNTDIKCPSCGHNIEVKDQGGIHGLPGLPAGVKFDPNDLEVLEHLEAKMGSDLCKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGDETRWHKTGKTRPVFAGGVVKGFKKILVLYTNYGRQKKPEKTYWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQSGNSIISDHPYEKIKRSDHNSTMPKNAPLVDCYSAPYINYEHVHVSHNIGESSPQFIPNLVVQGDGSYSFSNECKQRKTEEKVTLGRASW* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00607 306 FunFam NAC domain-containing protein 73 61 215 - -
Rops11g00607 306 SUPERFAMILY NAC domain 47 211 IPR036093 GO:0003677|GO:0006355
Rops11g00607 306 Gene3D NAC domain 62 215 IPR036093 GO:0003677|GO:0006355
Rops11g00607 306 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 24 261 IPR044799 GO:0003700
Rops11g00607 306 ProSiteProfiles NAC domain profile. 52 211 IPR003441 GO:0003677|GO:0006355
Rops11g00607 306 MobiDBLite consensus disorder prediction 131 146 - -
Rops11g00607 306 MobiDBLite consensus disorder prediction 125 146 - -
Rops11g00607 306 Pfam No apical meristem (NAM) protein 53 192 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00607 Rops-Chr11 8633848 8637354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00607 1 227 NAC Transcription Factor Family AT4G28500 69.421 2.19e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Rops11g00607 NAM 9.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00607 - - gmx:100809389 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00607 11 8633848 8637354 Rops11g00607 11 8633848 8637354 ECH