Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00606 ATGAACCATGTGGAGAATATTGCTTATGATTTGGTCATGGTCATTCTATCCATATCTCTCATAGTTCTTGGTGTTTTCCTCTTTTTGGCTTGCAAGAAGAAACCGGTTGAATCTGAAGAAACACTTCCTGTGAAGCTTTGTGCTCGTGCATACCCTTTGATGGAAATTGATGCTGCTACTGATGGCTTCAATCACAGGAGAATTGTTGGTCAAGGTCGCTTAGGAACACTGTATGCTGGAACACTTGAGAGAGGAGAACTTGTAGCTGTTAAACGCATTCATCCTTTTCTTGTGTTGAGCAATGCAGGATTTGGATTCTCAACAGTGTTAAAATGGCTCTCTTTAGCTCAACACCCCAACGTGGTTCCAATAATAGGATTCTCAGAAGCACCAGGTGAGAGAGTTATAGTCATGGAGTTTGTGCGCATGGCAAGCTTAGACTTTTATTTGCATCAAAACCCAGATGGGGCTTCACTTTTGGATTGGAACAAGAGGTTGAAGATTGCAGCTGGAGCAGCTACGGGTCTTAAATATTTGCATGAAGTGGTAGCACCAAACATTATACATGGGTGTGTTAAGTCCTCTAATATTCTTATTGATGTCAACTTTTGTGCTAGAATTTCTGATTATGGCCTTAACTTTTTGGCATCCCTAGAAAAGAGAGGGTTAGTAGGTTATGTAGATGATGAGTATTGGAATGAAGGAAGGGGTATCGGTGCTTCCAAGGAAAGTGATATTTATGGGTTGGGGGTGGTCCTATTGGAGCTTTTAAGTGGAAGAGGATGTGAGGAAGGGTTGTTGGTAAAGTGGGCATTGCCTTTGATCAAGGAAATGAGATTTAGTGAACTTTTGGATCCAAGGTTGGTGATTCCTTCTGACATGAAGCCTCTTGTTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAACTCAAGGAAATGCAGACCTTGCGTGGCTCAAGTGGCAACCATTTTGAACAATTTAGAGACGGAAGTGTGCCTTTCATAA 1008 0.4177 MNHVENIAYDLVMVILSISLIVLGVFLFLACKKKPVESEETLPVKLCARAYPLMEIDAATDGFNHRRIVGQGRLGTLYAGTLERGELVAVKRIHPFLVLSNAGFGFSTVLKWLSLAQHPNVVPIIGFSEAPGERVIVMEFVRMASLDFYLHQNPDGASLLDWNKRLKIAAGAATGLKYLHEVVAPNIIHGCVKSSNILIDVNFCARISDYGLNFLASLEKRGLVGYVDDEYWNEGRGIGASKESDIYGLGVVLLELLSGRGCEEGLLVKWALPLIKEMRFSELLDPRLVIPSDMKPLVRLAKVASACVGNSRKCRPCVAQVATILNNLETEVCLS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00606 335 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
Rops11g00606 335 FunFam Receptor protein kinase CRINKLY4 142 332 - -
Rops11g00606 335 FunFam serine/threonine-protein kinase-like protein ACR4 30 140 - -
Rops11g00606 335 Pfam Protein tyrosine and serine/threonine kinase 66 323 IPR001245 GO:0004672|GO:0006468
Rops11g00606 335 PANTHER OS01G0253100 PROTEIN 48 329 - -
Rops11g00606 335 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Rops11g00606 335 ProSiteProfiles Protein kinase domain profile. 63 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00606 335 Gene3D Transferase(Phosphotransferase) domain 1 142 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00606 Rops-Chr11 8582019 8583483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00606 48 325 Receptor kinase-like Gene Family AT3G59420 40.068 8.00e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Rops11g00606 PK_Tyr_Ser-Thr 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00606 - - vun:114187437 588.186