Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00601 ATGGAGACCGAGGCTACTTCAGAGGCAGAGAACAATACCCAGAAAAGGGACGATGCTGGTGATAACAGCAATGAGAACAACAACAACAACAATGGAAGTAACAGCAAAATTGTGAATTCAAGTGAGGGACAGAGCAAACCCAAGCGTCAGATGAAAACCCCTTTTCAGCTTGAAACGCTCGAGAAAGCTTATGCTTTGGAGACATACCCATCTGAAACGATGAGGGCGGAGTTGTCGGAGAAGTTGGGGTTGTCGGATCGGCAGTTACAGATGTGGTTCTGTCACCGGCGGTTGAAGGACAAGAAGGACTTGCCGTCAAAGAAGCCACGGAAGGCGCCACCGTTGCCGGATTCTCCTACTGAAGACCCAAGATTGGGCCATGAACTTGGTAATGATTATGGATCCGGGTCGGGTTCTGGGTCCAGCCCGTTTACCCGTTCAGAGTTGAGGAATGTGGGGCCCCGGTGTGTGCCGGGGTACTATGAGTCGCCACAAACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTTTGAGGGAAGATGGACCAATTTTAGGAATAGAGTTTGATCCATTGCCACCAGATGCATTTGGGGCACCCATAGCTGTTACAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAGTAAAGTATATGAAAGACATGATGCTAGAACCAATAAGGCTCCATTCCAGGCAATGGCAAGGACATTCCCTGAATATCCATTTCTTCCAAACCAGTCTGGCATTAGACCAGATGCTTTTGGACAATTGAGCCAACCTCATCTATATGAACACATGGAGGGTCCTGCCAGAACTCCCTCATTTCCCCATGGAAATGAACATCTACCCAGAACTCATGCTACCCAAAGTCATTCTTCTCGTGTTCGCCTTTTATCTCAAGACAAGCAAGGGATTCCCTATCCATCTCCTCCTCGAGACAACGATGTTGCCCCCCAAAGGGAACCTCACACAAACATAGGCAATACTCCAATGAACTCCCACTTTATTGATCACCCAATTGTTGGCCAAGAAAATCCTTATGCTTTACCTGGTGGACAAGTATTCCATAATGATGCAATATTGCGGGTGGAGAAGAAACGAAAGAGTGATGATTCCAGAGTCGCAAGGGAAGTTGAAGCCTATGAAATGAGGATGCGGAAAGAGCTTGAGAAACAAGATAACCTTAGACGGAAGAATGAAGAGCGATTGAGGAAAGAAATGGAAAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAGCGAGAAGAGGAAAGATCAAAGCGTGAGCAAAGACGGGAGATGGAACGTCGGGAAAAATTCTTGTTGAAAGAACATTTAAGAACTGAGAAAAGGAGGCTAAAAGAAGAGCTTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAGAAAGCAACTGCCCGTAGAATAGCTAAAGAGTCTATGGAGCTTATCGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGACTTTCCTCCATCATCCACATTGATCTTGATACTTTGCAAAATCTTGAATCATTTAGGGATTCATTGTGTGTTTTCCCACCCAAGAGTGTAAAGCTAACAAAGCCATTTGCCATCCAACCCTGGATCAACTCTGAACAAAATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGAGTTGTGGCCTTTTTCTCTTGATGAGTTTGTACAGGCGTTTCATGACTATGATTCAAGATTGTTGGGTGAAATACATGTTGCTCTTCTCAAAGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGATTGAATCAGAATGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAAATTGTGGAAGGAGCATATGCATGGGGCTTTGACATACGCAATTGGCAGAAGAACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGTTGGCGCTGACTGCAGGATTTGGGCCACAGCTGAAGAAAAGAACTATTACGTGGTCATATGCAAATGATAAAGATGAGGGAAGAAGTTGTGAAGATATCATCTCTACACTTCGTAATGGTTCTGCAGCTGAAAGTGCATTGGCAAAAATGCAAGAGAAAGGTCTATTAGCTCCTCGAAGATCAAGGCACCGGTTGACTCCCGGAACAGTTAAATTTGCAGCATTCCATGTTCTCTCACTGGAGGGTAGCAAGGGTTTGACAGTGCTAGAGCTTGCGGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACGACTAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCATCAACATATCGTGTAAGAGCTGCATTTAGAAAGGATCCTGCTGATGCTGAGTCTATTCTTTCAGAAGCAAGAAAAAAAATTCAGATATTTGAAAATGGTTTTCTAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAGGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGAAGATGATGATTTGGTAAATCCTTCAAGTGCAAACCAAAATTCAGAACAGTATGATGACACAAACATTTGCTCATCAAATGGAAACGAAAATTTGGGTCGTGATGTAGACCTTATTCAAAATGAATTTGATACAGATCTACCTCGTTTTCCTGAGAATGGTTCCAAGGATGCTGATTGTCCAAGTTATGTCACTGGACAACCTGTCGCTTGTGAAGATTTAAATACTGGAAATCTTGATGAAGATAACATGGAAATTGATGAAAGCAAGTCTGGAGAGTCCTGGGTTCAAGGGCTTACTGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCGATCCGTGTTGTTCTTGAGGATCGATTGGAAGCAGCGAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGTCTAAAAGATGATAATATTAGTAAATCTGATTTTCCGTCTCTTATTGGGAATAAAGTTGAAACACAATACACGTATCCTGCTGTGGAGGGCAACCAAAGCCCATTGCTTGACATTAATATTAACAATATCAATAATGAAGCTTCACCCAGCACTGCAGAAAACCAGAAAGAAGCTCCAGTTGCACAGAGCCTACCTAAGTCCTCATCAGTTCAAGATTTCTGCACAGGCACGGGTCCTGACAACCCTCAGACTCAGGTACCTGCTCAATATTCAAAAAGGTCACGTTCGCAGTTGAAATCTTATATTGCACATATAGCAGAAGAGATGTATGTCTACAGGTCTTTACCTCTTGGCCAAGATCGCAGACGTAATCGATATTGGCAGTTCGTTGCATCTGCTTCTAGCAATGATCCTGGTTCTGGCAGGATCTTCGTTGAACATCATGATGGCGATTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCTCTTTTGACATCACTGGATCCACGAGGGATCAGGGAATCTCATTTGCGCTTAATGTTGCTAAAGATTGAGAGTTCCTTTAAAGAAAATGTTCGAAAGAATACACAATGTGCCAAAATTGGAGGCAGTGGTGGAGTTTCTATTAAAAATGAATCTAATGAAACATATCCCGTCCCTGATCGCAATGCTGGATCTGACAGTTCTAGCAGTACCCTTCATGGATTGATCTTTGATAAATCTGAAACTTCATCATCCTTCAAAATTGAGCTTGGGAAAAGTGAGAGTGAGAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAATTCATCAATTTTATGTGCAATGAAATATGGCATAAAGAGATGCAAACCTCAGGTGGACATTTGTGATATCTGTCTCAATCCTTATTTTGTTGAAGACTCGCATTGCAATTCCTGCCACCGGACTTTTCCCTCAAATAATGGATTTAATTTTTCGAAACATGCGCTTCAATGTGTAGACAAGTTATCCAAAGATATTTATATTTTGGGAAATTCTCTCCCGATGCGGACAAGATTGCTTAGGGTCCTGTTGGCTTGTATGGAGGCATCTGTTCTCCCTGAAGCATTTGGAACAATTTGGACAGATGATGTTAGGAAGCATTGGGGTGTGAAGTTGAGTAAATCCTCTTCTGTTGAGGAACTGTTACAGATATTGACCCTATTTGAAAGAGCGCTACGGCGAGATTTTCTGTCATCAAACTTCTCTACAACAGACGAATTGTTGGGATCAAGCAGTATGTCAGAAAGTGCTGCACATGCTTCTACTGATCCTGAATCAGTTGCTGTACTTCCATGGGTTCCACAAACAACTGCAGCTTTGTCGCTCAGGCTTTTTGAGTTTGACACATCCATCAGCTACGTAAAGCTCGAGAGAGTTGAGCCTGGTGAGGAGAAAGAAGCAAGAGAATACATAAAGCTTCCATCAAGATATACTCCCTTCAAATCGAATAGGGAGGTTGATCCAGCAGAATATGACCACGATGAATTCACTAAAGATAAATCTGCTCCTAATAAAATCGTACGAAGTGGCAATAAACGTGGACGAGGGACTAATGATCAAGGACGGGGTAAAAAGCTGTCTAAAAGAGTGTACAATTCCAAACGAGATACTGGCCGCCGAAATGTAAAGGTCACTGAGAATCTAAGTAACAAATTAAAACAGCAGGGACGAGGAACACAAGGACAAGGTGGTGGACGAGGTCGCCGAACGGTCAGGAAACGAAGAGTGGAAAAGAGAGCTGTTGAAGATTTGTTGCTGGGCCATAGAGCAGCCAGTCATAGCTCCAAGAGTGGTAGAGAACCATTGAGAAACTTTGATGAAGAGTGGGATGGAGAAAAGGCAAGTCCCATGACTCCTGTACACATTGGGGTTGCTGACAATAGTAACAGTGCTGAAGAGGTGGAATCTGATGACAATGCTCAAGCTGTGGAATATGATCAAGGAAACTGGGAGGTAGGTTATAATGGTGTCCCCCCTAACAGATGGAGTAGGGATTTGGCTGGAATGAGTGATGAGGATGTGGATGCTTTTGAAGATGACAATGATAATGACAATGGCATTGAAGAGAATGAAGAGGAGGATTCAGAGGCAGATGTTATGAGTGAGGGTTCAGATGGCATAGCAAATAGAGTAGTAAATGTAGGAGGCTCAGACTCAGCTGTTTCTGAAGATTCTTCTGATTAG 5292 0.4318 METEATSEAENNTQKRDDAGDNSNENNNNNNGSNSKIVNSSEGQSKPKRQMKTPFQLETLEKAYALETYPSETMRAELSEKLGLSDRQLQMWFCHRRLKDKKDLPSKKPRKAPPLPDSPTEDPRLGHELGNDYGSGSGSGSSPFTRSELRNVGPRCVPGYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPIAVTEQQKRPSLAYDSKVYERHDARTNKAPFQAMARTFPEYPFLPNQSGIRPDAFGQLSQPHLYEHMEGPARTPSFPHGNEHLPRTHATQSHSSRVRLLSQDKQGIPYPSPPRDNDVAPQREPHTNIGNTPMNSHFIDHPIVGQENPYALPGGQVFHNDAILRVEKKRKSDDSRVAREVEAYEMRMRKELEKQDNLRRKNEERLRKEMERQDRERRKEEERLMRERQREEERSKREQRREMERREKFLLKEHLRTEKRRLKEELRKEKEAERRKAALEKATARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLTKPFAIQPWINSEQNVGNLLMVWRFLITFADVLELWPFSLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGLNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEIFRQLALTAGFGPQLKKRTITWSYANDKDEGRSCEDIISTLRNGSAAESALAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAFRKDPADAESILSEARKKIQIFENGFLAGEDADDVEREEESESDEVDEDPEDDDLVNPSSANQNSEQYDDTNICSSNGNENLGRDVDLIQNEFDTDLPRFPENGSKDADCPSYVTGQPVACEDLNTGNLDEDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRLKDDNISKSDFPSLIGNKVETQYTYPAVEGNQSPLLDININNINNEASPSTAENQKEAPVAQSLPKSSSVQDFCTGTGPDNPQTQVPAQYSKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGDWRLIDSEEAFDALLTSLDPRGIRESHLRLMLLKIESSFKENVRKNTQCAKIGGSGGVSIKNESNETYPVPDRNAGSDSSSSTLHGLIFDKSETSSSFKIELGKSESEKKAALRRYQDFQKWMWKECYNSSILCAMKYGIKRCKPQVDICDICLNPYFVEDSHCNSCHRTFPSNNGFNFSKHALQCVDKLSKDIYILGNSLPMRTRLLRVLLACMEASVLPEAFGTIWTDDVRKHWGVKLSKSSSVEELLQILTLFERALRRDFLSSNFSTTDELLGSSSMSESAAHASTDPESVAVLPWVPQTTAALSLRLFEFDTSISYVKLERVEPGEEKEAREYIKLPSRYTPFKSNREVDPAEYDHDEFTKDKSAPNKIVRSGNKRGRGTNDQGRGKKLSKRVYNSKRDTGRRNVKVTENLSNKLKQQGRGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHRAASHSSKSGREPLRNFDEEWDGEKASPMTPVHIGVADNSNSAEEVESDDNAQAVEYDQGNWEVGYNGVPPNRWSRDLAGMSDEDVDAFEDDNDNDNGIEENEEEDSEADVMSEGSDGIANRVVNVGGSDSAVSEDSSD* 1764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00601 1763 MobiDBLite consensus disorder prediction 290 306 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 134 148 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 100 128 - -
Rops11g00601 1763 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 952 995 IPR028942 -
Rops11g00601 1763 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1131 1203 IPR028941 -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1064 1110 - -
Rops11g00601 1763 ProSiteProfiles 'Homeobox' domain profile. 43 103 IPR001356 GO:0003677
Rops11g00601 1763 MobiDBLite consensus disorder prediction 407 447 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 840 892 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1629 1650 - -
Rops11g00601 1763 Pfam HB1, ASXL, restriction endonuclease HTH domain 742 810 IPR007759 GO:0006355
Rops11g00601 1763 SMART testlast3 560 619 IPR018501 -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1708 1736 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1551 1578 - -
Rops11g00601 1763 Gene3D - 29 104 - -
Rops11g00601 1763 SMART HOX_1 45 107 IPR001356 GO:0003677
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1579 1597 - -
Rops11g00601 1763 Pfam DDT domain 562 616 IPR018501 -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 273 338 - -
Rops11g00601 1763 Coils Coil 456 487 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1515 1763 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 867 892 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 23 52 - -
Rops11g00601 1763 CDD homeodomain 48 102 IPR001356 GO:0003677
Rops11g00601 1763 ProSiteProfiles HARE-type HTH domain profile. 742 811 IPR007759 GO:0006355
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1 56 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1230 1249 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 100 149 - -
Rops11g00601 1763 ProSiteProfiles DDT domain profile. 560 619 IPR018501 -
Rops11g00601 1763 Coils Coil 385 450 - -
Rops11g00601 1763 MobiDBLite consensus disorder prediction 1519 1542 - -
Rops11g00601 1763 SUPERFAMILY Homeodomain-like 33 102 IPR009057 -
Rops11g00601 1763 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 28 1763 IPR044977 GO:0006357
Rops11g00601 1763 MobiDBLite consensus disorder prediction 843 866 - -
Rops11g00601 1763 Pfam Homeodomain 46 102 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00601 Rops-Chr11 8518775 8532384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00601 39 1691 Homeobox Transcription Factor Family AT1G28420 49.738 0.0 1357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Rops11g00601 WSD 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00601 - - gmx:100777465 2682.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00601 11 8518775 8532384 Rops11g00601 11 8518775 8532384 ECH